Stella vacuolata: STVA_54400
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Entry
STVA_54400 CDS
T06335
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
svc
Stella vacuolata
Pathway
svc00300
Lysine biosynthesis
svc00470
D-Amino acid metabolism
svc01100
Metabolic pathways
svc01110
Biosynthesis of secondary metabolites
svc01120
Microbial metabolism in diverse environments
svc01230
Biosynthesis of amino acids
Module
svc_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
svc00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
STVA_54400 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
STVA_54400 (dapF)
Enzymes [BR:
svc01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
STVA_54400 (dapF)
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Paralog
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GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
BBK45420
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Position
5761032..5761919
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AA seq
295 aa
AA seq
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MANPSAAALPFRKMHGLGNDFVVIDARPGGVVLDAARSRAIADRHMGIGCDQLIVIEPPV
SSLADAFMRIRNPDGSEAEACGNATRCIASLLMGERGLDHVVVETVAGLLDAQAIGDGRI
AVDMGPARLDWRDIPLAEACDTLHVPVALGPVSDAVATSMGNPHATFFVDDLDRVAIADI
GPVLERHPMFPQRANIGFARLLSPGRLRLRMWERGAGITLACGSGACAALVAAARRGLVD
RRAEVVLDGGVLEVEWLRDGHVLMTGPVATAFTGTIDPSLLAACLPCSRPGHPPP
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatccgtcggcagccgcccttccgttccgcaagatgcacgggctcggcaatgat
ttcgtggtgatcgatgcgcgccccggcggggtggtgctggatgccgcgcggtcccgggcg
atcgccgaccgccatatgggcatcggctgcgaccagctgatcgtcatcgagccgccggtc
tcgtcgctggccgatgctttcatgcgcatccgcaaccccgacggcagcgaggcggaggcg
tgcggcaacgccacccgctgcatcgccagcctgctgatgggcgaacgcggccttgaccat
gtggtggtcgagaccgtggccggcctgctcgacgcccaggcgatcggcgacggacggatt
gccgtcgacatggggccggcccggctcgactggcgcgatatcccgctcgcggaagcctgt
gacacgctgcacgtgccggtcgccctggggccggtgtcggacgcggtcgcgaccagcatg
ggcaacccccacgcgaccttcttcgtcgacgacctggaccgggtcgcgatcgccgacatc
gggccggtgctggagcgccatcccatgttcccgcagcgcgccaacatcggcttcgcccgg
ctgctgtcgccgggccgcctgcgcctgcgcatgtgggaacgcggggccggcatcacgctc
gcctgcggctcgggcgcctgtgcggccctggtcgcggccgcccgtcgcggcctcgtcgac
cggcgggccgaggtggtgctggacggcggggtgctggaggtcgaatggctgcgcgacggc
catgtcctgatgaccggccccgtcgccacggccttcaccggcaccatcgatccttccctg
ctcgcggcctgccttccctgctcgcggcctgggcacccgcccccgtga
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