Stella vacuolata: STVA_54560
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Entry
STVA_54560 CDS
T06335
Symbol
rnhB
Name
(GenBank) ribonuclease HII
KO
K03470
ribonuclease HII [EC:
3.1.26.4
]
Organism
svc
Stella vacuolata
Pathway
svc03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
svc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
STVA_54560 (rnhB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
svc03032
]
STVA_54560 (rnhB)
Enzymes [BR:
svc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
STVA_54560 (rnhB)
DNA replication proteins [BR:
svc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
RNase H
STVA_54560 (rnhB)
Elongation factors (archaeal)
STVA_54560 (rnhB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_HII
SseB_C
Motif
Other DBs
NCBI-ProteinID:
BBK45436
LinkDB
All DBs
Position
5775382..5775987
Genome browser
AA seq
201 aa
AA seq
DB search
MPDFRLEADLGGIVCGIDEVGRGPWAGPVVAAAVIIDPDRLPDALRAAIDDSKKVPAARR
AELARAIRQHALVGVGAASAREIDRDNVLRATFTAMTRALGRLPIRPDAVLVDGNRAPPL
GCRVVTVVGGDGLCLSIAAASIVAKVLRDAMMAKLALRHPGYGWETNVGYGTTAHREGLS
RFGVTCHHRRSFAPVTQMLSL
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atgccggattttcgtctggaggcggacctgggcgggatcgtctgcggcatcgacgaggtc
gggcgcggcccgtgggccgggccggtcgtggccgccgccgtcatcatcgacccggatcgc
ctgccggatgcgctgcgggcggccatcgacgacagcaagaaggtgccggcggcgcgccgg
gccgaactcgcccgggccattcgccagcatgccctggtcggcgtgggcgcggccagcgcg
cgtgagatcgatcgcgacaacgtgctgcgcgcgaccttcaccgccatgacgcgcgcgctg
gggcggctgccgatccggcccgacgcggtgctggtcgacggcaaccgggcgccgccgctc
ggctgccgggtggtgacggtggtcggcggcgacgggctctgcctgtcgatcgccgcagcc
tcgatcgtggccaaggtgctgcgcgacgcgatgatggccaagctcgccctgcgccacccc
ggctatggctgggaaaccaacgtcggatacggcaccacggcgcaccgcgagggcctgtcc
cgattcggggtgacgtgccaccaccggcgaagtttcgccccggtcacccagatgttgagt
ctctag
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