Streptomyces viridosporus: CP969_03055
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Entry
CP969_03055 CDS
T07568
Name
(GenBank) exonuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
svd
Streptomyces viridosporus
Brite
KEGG Orthology (KO) [BR:
svd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
svd03400
]
CP969_03055
DNA repair and recombination proteins [BR:
svd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CP969_03055
Archaeal homologous recombinant proteins
CP969_03055
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
SbcD_C
Asp_Glu_race
Motif
Other DBs
NCBI-ProteinID:
QEU83789
LinkDB
All DBs
Position
612993..614165
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AA seq
390 aa
AA seq
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MKFLHTSDWHIGKVLKGHNRLDEQRAVLREIVRVARDHRVDAVLVAGDLYESSAPSAQAQ
QLLVQTLLALRRTGAEVIAIAGNHDHAATFDAYRPLMASAGITLAGTARPAADGGVVEFT
ARSTGEPVAVALLPFLARRHAVRAAQLVTETPREAATGYGRLVRDLLAALTAGFRDDTVN
LVMAHLTAAGGKLGGGERSAQSVLEYWVPTSAFPPDAHYVALGHLHRRQSLPAPCPVHYC
GSPITLDFGEENDSTVVLVVEAEVGTPTRVTAEVPIGSGRRLRTVRGTVDEVTQRAEEFG
DDYLRVLLCEPARAGLRQDVQRLLPNALEVRIDPGFAAPVHTTGPSPPADGADRSPAELF
HAYCIARGIADERVEALFTRLHDQATAMHA
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcctgcacacctcggactggcacatcggcaaggtgctcaagggccacaaccgg
ctcgacgaacagcgggcggtcctgcgcgagatcgtccgggtggcacgggatcaccgcgtt
gacgccgtcctcgtcgccggcgacctgtacgagtcgtccgccccgtcggcgcaggcccag
cagctgctggtgcagacgctgctcgcgttgcgacgcaccggcgctgaggtcatcgcgatc
gccggcaaccatgaccacgccgccactttcgacgcctaccggccgctcatggcgagcgcg
gggatcaccttggccggcactgcccgccctgcggccgacggcggggtggtggaattcacc
gcgcgctcgacgggggagccggtcgccgtcgccctgctgccgttcctggcccgacgccac
gcggtacgggccgcccagctggtcaccgagacgcctcgggaggccgcgaccggctatggc
cggctggtacgggacctgcttgccgcgctcacggccggcttccgcgacgacacggtcaac
ctggtgatggcccacctgacggcggccgggggaaagctcggcgggggtgagcggtccgcc
cagtcggtcctcgagtactgggtgccgaccagtgccttcccacccgacgcccactacgtc
gcgctcgggcacctgcaccgccgccagtcgctgcccgcaccgtgtccggtgcactactgc
ggcagtccgatcaccctcgacttcggtgaggagaacgactccaccgtggtcctcgtcgtc
gaggccgaggtcggcacgcccacccgcgtcaccgccgaggtgcccatcgggtccggacgg
cggctgcgcaccgtacgcggcaccgtcgacgaggtgacccagcgcgccgaggaattcggc
gacgactacctgagggtgctgctgtgcgaaccagcgcgcgcggggctacggcaggacgtg
cagcggctgctgcccaacgcgctggaggtgcgcatcgatccggggttcgccgcaccggtg
cacaccaccgggccgtctcccccggccgacggcgcggaccgcagccccgccgagctgttc
cacgcgtactgcatcgcccggggaatcgccgacgaacgggtcgaagcactgttcaccagg
ctccacgaccaggccaccgccatgcacgcctga
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