Streptomyces viridosporus: CP969_05340
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Entry
CP969_05340 CDS
T07568
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
svd
Streptomyces viridosporus
Brite
KEGG Orthology (KO) [BR:
svd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
svd03021
]
CP969_05340
Transcription machinery [BR:
svd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CP969_05340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_Crp_2
DUF7343
MarR_2
HTH_3
Sigma70_ECF
MarR
GerE
HTH_37
HTH_31
Motif
Other DBs
NCBI-ProteinID:
QEU84165
UniProt:
A0ABX6A9J5
LinkDB
All DBs
Position
1126196..1126987
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AA seq
263 aa
AA seq
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MRTGNPTKPHPHDDAPHTAEAFARLARLPEGPERRALRDDLVQAWLPMAERIAVRFRGRG
EALEDLYQVAALGLVKAVDHYDPVRGNAFEAYAVPTITGEIKRHFRDHMWTLHVPRRVQD
LRNRVRHAARELAQTTVGRAPTVPEIAAYARLTESEVRTGMEALECFSALSLEAEMPGTD
GYALGDSVGGPDPAFDTVVDRVTVRPFLEALPERERLILYLRFFRGMTQSTIAEHLGISQ
MHVSRLLSSCFAQLREELLTEAG
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaccggcaatcccacgaagccgcacccccacgacgacgccccccacacggccgag
gccttcgcacgcctggcccggctgcccgaagggcccgagcgcagggcactgcgcgacgac
ctggtccaggcctggctgcccatggccgaacggatcgccgtgcgtttccgggggcgcggc
gaggctctggaggatctgtaccaggtggcggccctcggcctggtcaaggccgtcgaccac
tacgacccggtgcgcggcaacgccttcgaggcgtacgccgtgccgaccatcaccggggag
atcaagcgccacttccgtgaccacatgtggaccctgcacgtcccgcgccgcgtgcaggac
ctgcgcaaccgcgtgcggcacgcggccagggagctggcgcagaccaccgtggggcgggcc
cccacggtccccgagatcgccgcgtacgcccggctgacggagagcgaggtgcgcaccggc
atggaggcgctggagtgcttctccgcgctgtcgctggaggcggagatgcccggcacggac
ggctacgccctcggggactcggtcggcggaccggacccggcgttcgacacggtcgtcgac
cgggtgacggtccggcccttcctcgaggcgctcccggagcgggagcggctcatcctctac
ctgcggttcttccgggggatgacgcagagcaccatcgccgagcacctcggcatctcgcag
atgcacgtctcccggctgctcagcagctgtttcgcccagctgcgcgaggaactgctgacc
gaggccggctga
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