Streptomyces viridosporus: CP969_05415
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Entry
CP969_05415 CDS
T07568
Name
(GenBank) HAMP domain-containing protein
Organism
svd
Streptomyces viridosporus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAMP
HAMP_2
HATPase_c
Response_reg
GAF_2
HisKA
GAF
Laminin_II
ATG14
CovS-like_HAMP
OmpH
Fez1
CCDC93_CC
Motif
Other DBs
NCBI-ProteinID:
QEU84178
LinkDB
All DBs
Position
1144472..1148470
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AA seq
1332 aa
AA seq
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MTGKNAEGTDAVPRDQELKQLLAGLTAVRDGDFGTRLPDDADGLMGDIAKVFNGMVDQLS
VFTSEVTRVAREVGTEGALGGQAEVPGVSGTWADLTDSVNAMAGNLTAQVRNVAQVTTAV
AKGDLSQKITVDARGEILELKNTINTMVDQLSAFADEVTRVAREVGTEGRLGGQADVQGV
KGTWRDLTDSVNFMAGNLTGQVRNIALVATAVAKGDLSQKITVDARGEILELKNTINTMV
DQLSAFADEVTRVAREVGTEGRLGGQAQVRGVSGTWKDLTDNVNVMASNLTGQVRSIAQV
ASAVGRGDLSQRIRVEAAGEVAALADVINTMVDTLSAFADEVTRVAREVGTEGRLGGQAR
VPNVAGTWKDLTDNVNSMANNLTGQVRNIALVTTAVARGDLSKKIDVDARGEILELKTTI
NTMVDQLSAFADEVTRVAREVGTEGRLGGQAEVEGVSGTWKRLTENVNELAGNLTRQVRA
IAEVASAVAEGDLTRSITVEASGEVAELKDNINSMVESLRETTRANQEQDWLKSNLARIS
GLMQGHRDLPVVAELIMDELVPLVSAQYGAFYLAEDGDGGPELRLVGSYGYPDDDARPTR
IPFGRTLVGQAARSRRTITVDELPPDYVTISSGLGRVVPTALVLLPIVVEGQVLGVIELA
SVTPFTQIHQDFLAQLMETVGVNVSTIVANARTDELLVESQRLTAELQQRSAELQTQQEE
LQHSNAELEEKAALLATQNRDIEAKNLQIEQARQELEARAQQLSLASKYKSEFLANMSHE
LRTPLNSLLILAQLLAQNPSRNLSPKQVEYAQIIHSAGSDLLQLINDILDLSKVEAGKMD
VSPELVTLRQLIEYVEATFRPMTMQKNLDFTVTTAPGAPADLLTDDSRLRQVLRNLLSNA
VKFTERGGVELRIEPAADDEVPGSVVRGGSVVAFRVKDTGIGIPEQHLESIFGAFQQADG
TTSRKYGGTGLGLSITREIAHLLGGAVTVDSVAGQGSTFTLFLPVTRPDFETLLRPAADR
GPAAAAPDAPSRQRPAIEAGTGSGRRPRRLLVVEERPRGLLTLVAESVVQDVTHGRGDGT
SRPSVDIITTVGAQEAAGALAAEPCHCVVLELGMAEEEVTRFLEALRGDSALASVPVLVH
SGHRADAAVEEALRARTEGTALEFLSSLDELRERIALHLSAEEPGDVLSLVRPDETQRPA
PQTVVDGSFSGRTILVVDDDARNLFALSGILELHGFRVLHAENGRKGIDQLVNNPDVALV
LMDVMMPELDGYAATAEIRSMPRYAELPIIAVTAKAMPGDREKSLASGASDYVTKPVDTQ
DLIACVRRWLPA
NT seq
3999 nt
NT seq
+upstream
nt +downstream
nt
atgaccggcaagaacgccgagggaaccgacgcggtgccccgggaccaggagctgaagcag
ctcctggcggggctgacggccgtgagggacggggacttcggcacccggctgccggacgac
gcggacggcctcatgggggacatcgccaaggtcttcaacggcatggtggaccagctctcg
gtgttcacctccgaggtgacgcgcgtcgcccgcgaggtcggcaccgaaggggccctgggc
gggcaggccgaggttcccggggtctcgggcacctgggccgacctgacggactcggtgaac
gccatggcgggcaacctcaccgcgcaggtccgcaacgtcgcccaggtgacgacggccgtc
gccaagggcgacctgtcgcagaagatcaccgtcgacgcccgcggcgagatcctcgaactc
aagaacaccatcaacacgatggtcgaccagctctccgccttcgccgacgaggtcacccgc
gtcgcccgcgaggtcggcaccgaaggacgcctcggcggacaggccgacgtgcagggcgtg
aaggggacctggcgcgacctcaccgactcggtgaacttcatggcgggcaatctgaccggc
caggtccgcaacatcgcgctggtggcgacggccgtcgccaagggcgacctgtcgcagaag
atcaccgtcgacgcccgcggtgagatcctcgaactcaagaacaccatcaacacgatggtc
gaccagctctccgccttcgccgacgaggtcacccgcgtcgcccgcgaggtcggcaccgag
ggacgcctcggcggacaggcccaggtgcggggcgtctcgggcacctggaaggacctcacc
gacaacgtcaacgtgatggcgtccaacctgaccggtcaggtccgctccatcgcccaggtc
gcctccgccgtgggccggggcgacctgtcgcagcggatcagggtcgaggccgcgggcgag
gtcgccgcgctggccgacgtcatcaacaccatggtcgacacgctgtccgccttcgccgac
gaggtcacccgcgtcgcccgcgaggtcggcaccgaaggacgcctcggcggacaggcgcgc
gtgccgaacgtcgccggcacctggaaggacctcaccgacaacgtcaattccatggccaac
aacctcaccggtcaggtgcgcaacatcgcgctggtgacgaccgcggtggcccggggcgac
ctgtcgaagaagatcgacgtcgacgcgcgcggcgagatcctggagctgaagacgaccatc
aacacgatggtcgaccagctctccgccttcgccgacgaggtcacccgcgtcgcccgcgag
gtcggcaccgagggacgcctcggcggacaggccgaggtggagggggtctcgggcacctgg
aagcggctgacggagaacgtcaacgaactggccgggaacctcacccggcaggtgcgggcg
atcgccgaggtcgcgagcgccgtcgccgagggcgatctgacgcgttcgatcaccgtggag
gcctccggtgaggtcgccgagctcaaggacaacatcaactcgatggtggagtccctgcgc
gagaccacccgggccaaccaggagcaggactggctcaagagcaacctggcccggatctcc
ggtctgatgcagggacaccgcgacctgcccgtggtcgccgaactgatcatggacgagctg
gtgccgctggtgtcggcccagtacggcgccttctacctcgcggaggacggcgacggcggc
cccgagctgcggctcgtcggctcctacggctaccccgacgacgacgcccggcccacccgg
atccccttcggccgcaccctggtcggccaggccgcccgcagccgccgcaccatcacggtg
gacgagctgccgccggactacgtgaccatctcctccgggctcggccgggtggtgccgacc
gcgctggtgctgctgcccatcgtggtcgagggccaggtcctcggcgtcatcgaactggcg
tcggtgaccccgttcacccagatccaccaggacttcctggcccagctgatggagaccgtc
ggcgtcaacgtcagcaccatcgtggccaacgcccgcaccgacgagctgctggtcgagtcg
cagcggctgaccgccgaactccagcagcgctcggcggagctgcagacgcagcaggaggaa
ctccagcactccaacgccgagctggaggagaaggccgcgctgctggcgacgcagaaccgg
gacatcgaggcgaagaacctccagatcgaacaggcccggcaggagctcgaggcacgggcc
cagcagctgtcgctggcctcgaagtacaagtcggagttcctggcgaacatgagccacgag
ctgcgcaccccgctgaacagcctgctgatcctggcccagttgctcgcccagaacccctcg
cgcaacctcagcccgaagcaggtcgagtacgcgcagatcatccactccgccggttcggac
ctgctgcagctgatcaacgacatcctcgacctgtccaaggtcgaggccgggaagatggac
gtcagccccgagctggtgacgctgcgccagctcatcgagtacgtcgaggccaccttccgg
cccatgacgatgcagaagaacctggacttcaccgtgacgacggccccgggcgcgccggcc
gacctgctcaccgacgactcccggctgcggcaggtgctgcgcaacctgctgtccaacgcg
gtcaagttcaccgagcggggcggggtggagctgcggatcgagcccgcggcggacgacgag
gtgcccggctccgtggtgcggggcggctccgtggtggccttccgggtgaaggacaccggc
atcggcattccggagcagcacctggagtcgatcttcggcgccttccagcaggccgacggc
acgaccagccgcaagtacgggggcacggggctcggtctgtccatcacccgggagatcgcg
cacctgctcggcggagcggtcacggtggacagcgtcgcgggccagggcagcacgttcacg
ctgttcctgcccgtgacccggccggacttcgagacgctgctgcggcccgccgcggaccgg
ggcccggccgcggccgccccggacgcaccgtcccggcagcggccggcgatcgaggcgggg
accggatcgggccggcgcccccggcgactgctcgtcgtggaggagcgtccccggggcctg
ctgaccctggtcgcggagagcgtcgtccaggacgtcacgcacggccggggcgacggcacc
tcgcggccctcggtcgacatcatcaccaccgtcggcgcccaggaggccgccggggcgctg
gccgccgagccgtgccactgcgtggtgctggagctcggcatggccgaggaggaggtcacc
cgcttcctggaggcgctgcggggcgactccgccctggcgagcgtgccggtgctggtgcac
agcggccaccgggccgacgcggcggtggaggaggccctgcgggcccgtaccgagggcacg
gcgctggagttcctgtccagcctcgacgagctgcgcgagcgcatcgccctgcacctctcc
gccgaggaacccggcgacgtgctgtccctggtgcgcccggacgagacgcagcggccggct
ccgcagaccgtcgtggacggctcgttctccggccgcacgatcctggtcgtggacgacgac
gcgcgcaacctcttcgcgctcagcgggatcctggaactgcacgggttccgggtgctgcac
gcggagaacggccgcaagggcatcgaccagctcgtgaacaacccggacgtggcactcgtg
ctgatggacgtgatgatgcccgagctggacggctacgccgccaccgccgagatccgctcc
atgccgcggtacgccgagctgcccatcatcgcggtcaccgcgaaggcgatgcccggggac
cgggagaagagcctcgcctcgggggccagcgactacgtcaccaagccggtcgacacccag
gacctgatcgcctgcgtccggcgctggctgcccgcatga
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