Streptomyces viridosporus: CP969_12640
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Entry
CP969_12640 CDS
T07568
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
svd
Streptomyces viridosporus
Pathway
svd02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
svd00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CP969_12640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
svd03021
]
CP969_12640
Transcription machinery [BR:
svd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CP969_12640
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
DUF7645
Motif
Other DBs
NCBI-ProteinID:
QEU85474
UniProt:
A0ABX6AEL8
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All DBs
Position
2706766..2707773
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AA seq
335 aa
AA seq
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MNATDVPAPEDLLLAEDDETDAPAPRLSSDLGTADQVKDYLRLISRVRLLTAEQEVELAK
RIEAGLYAERLLAEEPVLEPRYRRELGLLAEDGSRAKNHLTEANLRLVVSVAKRYTGRGL
QFMDLIQEGNAGLIRVVEKFDYTKGFKFSTYATWWIKQGITRAMADQSRTIRIPVHAVEV
INRVARVRRELIRATGTEPAPEDVAERASISVEKLAELDAYAREPVSLDLPLSEEGGGEF
GDLIVDSDSPSPWEVVAFGHLQRAVRSVLADLSPREAGIISLRYGLFGERPRTLEEIGQV
YGVTRERIRQIESKTMSKLRHPARSHALRDYLTDA
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccacggacgtgccggcccccgaggacctcctgctcgccgaggacgacgagacc
gacgcgcccgcgccccggctctcctccgacctcggcacggccgaccaggtcaaggactac
ctccggctcatctcccgggtccgactgctcaccgccgagcaggaggtggagctggccaag
cgcatcgaggccgggctgtacgccgagcggctgctcgccgaggaaccggtcctcgagccg
cggtaccgccgggaactcggtctcctcgccgaggacggaagccgcgccaagaaccacctc
accgaggccaacctccgcctcgtggtgtccgtcgccaagcgctacacggggcgcggactg
cagttcatggacctcatccaggagggcaatgccggactcatcagggtcgtggagaagttc
gactacaccaagggcttcaagttctcgacctacgccacctggtggatcaagcaggggatc
acccgggccatggccgaccagagccgcaccatccgcatcccggtgcacgcggtggaggtc
atcaaccgcgtggcgcgggtccgccgcgaactgatccgcgccaccggcaccgagcccgca
ccggaggatgtggccgagcgggcgtcgatctccgtggagaagctggccgaactcgacgcg
tacgccagggagcccgtgtccctggaccttcccctgtccgaggagggcggcggcgagttc
ggcgacctcatcgtggacagcgactcgccctccccctgggaggtggtcgccttcgggcac
ctccagcgcgccgtccggagcgtcctggcggacctgagcccgcgcgaggccggcatcatc
tccctgcggtacggcctcttcggcgagcggccgcggaccctggaggagatcgggcaggtc
tacggcgtgacccgggagcgcatacgccagatcgagtccaagacgatgagcaagctccgg
caccccgcccgctcgcacgcactgcgggactacctcaccgacgcgtga
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