Streptomyces viridosporus: CP969_12650 Help Entry CP969_12650       CDS       T07568                                  Name (GenBank) TIR domain-containing protein Organism svd  Streptomyces viridosporus SSDB OrthologParalogGene clusterGFIT Motif Pfam:  WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_TEP1_2nd WDR55 EIF3I Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML WD40_MABP1-WDR62_1st Beta-prop_CAF1B_HIR1 ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_WDR75_1st TIR_2 Beta-prop_IFT122_1st Beta-prop_IFT140_1st Beta-prop_TEP1_C Beta-prop_WDR19_1st Beta-prop_DCAF4 NBCH_WD40 Beta-prop_EIPR1 Beta-prop_SCAP Beta-prop_HPS5 Beta-prop_RIG_2nd Beta-prop_Nup120_160 Beta-prop_Vps41 WDR54 Beta-prop_SPT8 PEP5_VPS11_N TIR AAA_16 AAA_22 Pentapeptide ATPase_2 Beta-prop_WDR75_2nd NB-ARC Beta-prop_ELP1_1st PQQ_3 nSTAND1 WD_LRWD1 NACHT DUF7099 MarR_2 ThsB_TIR Motif Other DBs NCBI-ProteinID:  QEU85476 LinkDB All DBs Position 2708718..2712668 Genome browser AA seq 1316 aa AA seqDB search MLEMGVGTIDGSLKEWHGPIQSRPPPPGPDGGALSRPRPLLGCPEVRAMSISYLFSTYHV PPDGFVDRTREVSRLLNFMESGCRVCTVYGLGGVGKSALAYRLAQAGGTSSRRTIWVSLT NAPPADAFLHGLLSLFTDRDTASPGTPLEQLITCLDDEPSLIVLDNLEVLLDSERFSGEF RPGYEEYGTLLRCLASEPHRSTVLITSRENPSFLRETSASVRAMHLQGLPKVPARTLLAR RGLRGDVRLRRDLVSRYDGNPLAIQLVSDLILDIHDGSIARFVESGEFLFGELEGLFHQH FERLTHAERLVLFRLAAARRPLTVREISAEPRIGTPSSAATLLQRLRRRSLVQESNGSFY LQYMIQEFVTARLNLACVEEVRTGEPDVLTRFALVDAAMPEHVREAQRRFLSQPIMNMLQ DRLGSASQVAPRLLSLLDASRVGSEAYGTFLAANALSIHHAWTSDLSGLDLSHLVLRQVD LSGIRLSHATARMTEFSGCRFPGVYHYVFGMDFSPEGKAAAIGQSGGSVLLVNVPDGTPL RTLPWEADWIRAVAFSPDGGRLACSDEKGRLRVWDLATNLPTDYPGHDRQTRSLVFSADG RVLFSAGEDRRILAWSVEPRASEPRVLCAIDAEIWGLHGAPASTLIAAACDEVCVRMWDT ATGEEVSLEGRAPVAGRCLRFSTDGRHVFVGCDDGAIRVWNTESRKLVGTLLGHTSSVWA VAVTRNASGEVLITGSHDETIRVWNIADPSAARCERVINSLDGPVWPVSADSEGQYFATV GRNSTIRFWDTADAECLEVLAGSSGTVLSVASSPDGRLLASGGHDRLVRLWNAATGDCLA ELRGHTAGVRAVAFRPQGNVLATASEDWDVRLWDLRTNQPSAVLTGSRNWLWTVAFEPNG HSLAAAGADAVIRIWDIQGRGGVRAFTGHEARVRAVQYTRDGQRLVSVGEDGQTRLWQVA SGGSELLGTVEGHVTCVCVLADDLCVTGSSDGALRLWDLTSRTLLRQARAHEGAVLALLA APDGNTFLSAGQDGHLRVWGRDGLRLHGVSRTAAGTVRSLAWHSDGAYVAAAGGDEAIRR YTYPDLEEVEPFRVPRQFEGLDISGCQGITPAEHHSLVALGAVDSPSVTRPAVHHRTTRP APRHEEPRAPRALTRPARMFISYSHRDDEFRSQLEKHLSTLRYRGLLDSWSDRQIRPGDD WAGSIDENLESADIILLLVSADFLASEYCRDVEMRRALERHREGTARVVPVVLRACDWNG FPFGSFQALPRDGRPVTAWPNPDEAFTDIAVWLRTTLEDIAQSHRPGGTPTERSQS NT seq 3951 nt NT seq  +upstreamnt  +downstreamnt atgcttgaaatgggagttggcacgatcgacggctcgctgaaggaatggcacggcccgata caatcgcgcccgccaccgcccggcccggacggtggcgcgttgtcgcgcccacgtcctctc ctgggctgtccggaggtgagagccatgtccatctcgtacctgttcagcacctaccacgtg ccaccggacggcttcgtcgaccgcaccagggaggtcagcagactcctcaacttcatggag tcgggctgtcgggtctgcacggtgtacggactgggcggcgtcgggaagagcgcactcgcc taccggctggcgcaggccgggggcacctcgtcgcgccgcacgatctgggtctccctcacc aacgcgcccccggccgacgcattcctgcacgggctgctgtcgctgttcaccgaccgggac accgcgtccccggggacaccgctggaacagctcatcacctgcctcgacgacgagccgtcc ctcatcgtgctggacaacctggaggtcctcctcgactcggagcggttctccggggagttc cggcccgggtacgaggagtacggcaccctgctgcgctgcctggcgtccgaaccccaccgc tcgacggtactgatcacctcgcgtgagaacccgtcgttcctgcgggagacgagcgccagc gtgcgcgccatgcacctgcagggcctgcccaaggtgccggcccggacgctcctggcccgg cgcggcctgcgcggcgacgtacggctgcgccgggacctcgtcagcaggtacgacggcaac ccgctggccatacagctcgtctccgacctgatcctcgacatacacgacgggagcatcgcc cgcttcgtggagtccggcgaattcctcttcggggaactggaagggctgttccaccagcac ttcgagcgcctgacgcacgccgagcggctggtgctgttccggctcgccgcggcccgccgt cccctcacggtccgcgagatctcggccgagccgcggatcggcaccccgtcgtccgcggcg acgctgctgcagcgtctgcggcgcaggtccctggtccaggagagcaacggctccttctac ctccagtacatgatccaggagttcgtgacggcacggctcaacctggcctgcgtcgaggag gtccgcaccggcgaaccggacgtgctcacccggttcgcgctcgtggacgccgccatgccg gagcacgtacgggaggcccagcgccgcttcctgtcccagccgatcatgaacatgctgcag gaccggctgggctccgccagccaggtcgccccgcggctgctctccctgctggacgcctcc cgcgtcggctcggaggcgtacggcacgttcctcgcggcgaacgccctctcgatccaccac gcgtggaccagcgacctctccggcctcgacctctcccatctggtgctgcgccaggtggac ctgtccggcatccggctctcgcacgccacggcccggatgacggagttctccggatgccgc ttccccggcgtctaccactacgtcttcggcatggacttctcaccggagggcaaggccgcg gcgatcgggcagagcggcggttcggtcctgctggtcaacgtgccggacggcacgccgctg cgcaccctcccgtgggaggcggactggatcagggccgtggccttctcccccgacggcgga cggctcgcctgctccgacgagaagggccggctgcgcgtgtgggacctggccaccaacctc cccaccgactatcccggccacgaccggcagacccgcagcctggtcttctcggccgacggg cgcgtcctgttcagcgcgggcgaggaccggcgcatcctcgcctggtccgtcgagccccgg gcgagcgaaccacgggtgctgtgcgcgatcgacgcggagatctggggactgcacggcgcg ccggcctcgaccctgatcgccgccgcctgcgacgaggtgtgcgtccgcatgtgggacacc gccaccggtgaggaggtctccctggaggggcgcgcgccggtggccggccggtgcctgcgc ttctccaccgacggcaggcacgtgttcgtcgggtgcgacgacggcgcgatccgggtctgg aacaccgagagccgcaagctcgtcggcacccttctcgggcacacctcgtcggtgtgggcc gtcgcggtgacccggaacgcctccggagaagtgctcatcaccggcagccacgacgagacg atccgggtgtggaacatcgccgacccgtcggccgcgcgctgcgagcgggtgatcaacagc ctcgacggcccggtgtggccggtctccgccgacagcgaggggcagtacttcgccaccgtc ggccgcaactccaccatccgtttctgggacacggccgacgccgaatgcctggaggtgctg gccggcagctcggggacggtgctgagcgtggcgtcgtcaccggacggccgcttactggcc tcggggggccacgaccgactcgtgcgcctctggaacgccgcgaccggcgactgcctggcc gaactgcgcggccacacggcgggggtgcgggcggtcgccttccggccgcagggcaacgtc ctggcgacggcgagcgaggactgggacgtacgcctgtgggacctgcggacgaaccagccg tccgcggtgctcaccggttcgcgcaactggctgtggacggtcgccttcgaaccgaacggg cacagtctggcggccgccggcgccgacgccgtcatcaggatctgggacatccaggggcgg ggcggcgtacgggcgttcaccgggcacgaggcacgggtacgggccgtccagtacacccgg gacggacagcgtctggtgtcggtcggggaggacgggcagacccgcctgtggcaggtcgcg agcggcggctccgaactcctcggcaccgtcgagggccacgtcacctgtgtgtgcgtgctc gccgacgacctgtgcgtgaccggaagcagtgacggggcgctgcgcctgtgggacctgacc tcccggacgctgctccgccaggcccgggcgcacgagggcgcggtgctggccctgctggcc gcgcccgacgggaacaccttcctgagcgcgggccaggacggccacctgcgggtgtggggg cgggacggactgcgcctgcacggggtgtcccgaacggccgccggaacggtccgctccctc gcctggcactccgacggcgcgtacgtggcggccgcgggcggcgacgaggcgatccgccgc tacacctacccggacctcgaagaggtcgagcccttccgggtgcccaggcagttcgagggc ctcgacatcagcggctgccagggcatcacccccgccgaacaccactcgctcgtcgccctc ggagcggtcgactcgccgtccgtcacgaggccggccgtccaccaccgcaccacgcgtccc gcaccgcggcacgaggagccccgggccccgagggcgctcaccaggccggcccggatgttc atctcctactcgcaccgtgacgacgagttccgctcccaactggagaagcacctgagcacc ctgcgctaccgcgggctgctcgactcctggtccgaccggcagatccggccgggcgacgac tgggcgggttcgatagacgagaacctggaatcggccgacatcatcctcctgctcgtcagt gccgacttcctggcctccgagtactgccgggacgtggagatgcgcagggccctggagcgg caccgggaagggaccgcgcgcgtcgtccccgtggtgctccgcgcgtgcgactggaacggc ttccccttcggctcgttccaggccctgccgcgggacggccggccggtcaccgcctggccg aaccccgacgaggccttcaccgacatcgccgtgtggctgcgcacgacgctggaggacatc gcccagtcccaccgacccggcgggacccccacggaacggagccagtcttga

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