Streptomyces viridosporus: CP969_13910
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Entry
CP969_13910 CDS
T07568
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
svd
Streptomyces viridosporus
Pathway
svd03030
DNA replication
svd03430
Mismatch repair
svd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
svd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CP969_13910 (holA)
03430 Mismatch repair
CP969_13910 (holA)
03440 Homologous recombination
CP969_13910 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
svd03032
]
CP969_13910 (holA)
03400 DNA repair and recombination proteins [BR:
svd03400
]
CP969_13910 (holA)
Enzymes [BR:
svd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CP969_13910 (holA)
DNA replication proteins [BR:
svd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CP969_13910 (holA)
DNA repair and recombination proteins [BR:
svd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CP969_13910 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
QEU85687
LinkDB
All DBs
Position
complement(2979286..2980287)
Genome browser
AA seq
333 aa
AA seq
DB search
MLVAMARKNASDDPLAPVTLAVGQEDLLLDRAVREVVAAAKAADADTDVRDLTPDQLQPG
TLAELTSPSLFAERKVVVVRDAQDLSADTVKDVKAYLGAPAEEITLVLLHAGGAKGKGLL
DAARKAGAREVACPKMTKPADRLAFVRGEFRTTGRSATPEACQALVDAIGSDLRELASAV
SQLVADVEGTIDEAVVGRYYTGRAEASSFTVADRAVEGRAAEALEALRWSLSTGVAPVLI
TSALAQGVRAIGKLQSARGGRPGDLARELGMPPWKIDRVRQQMRGWTPDGVAVALRAVAE
ADAGVKGGGDDPEYALEKAVVAIARAARSRGRG
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgcttgtcgcgatggccaggaagaacgcatccgacgaccccctcgcccccgtgacgctc
gccgtgggccaggaggacctgctgctcgaccgtgccgtgcgggaggtggtggccgccgcg
aaggccgccgacgccgacacggacgtccgcgacctgaccccggaccagctccagcccggc
accctcgccgagctgacgagcccgtcgctcttcgcggagcgcaaggtcgtggtcgtgcgc
gacgcgcaggacctgtcggccgacaccgtcaaggacgtgaaggcgtacctcggggcgccc
gccgaggagatcacgctggtcctgctgcacgcgggcggggccaagggcaaggggctgctc
gacgcggcgcgcaaggcgggggcgcgggaggtggcgtgcccgaagatgaccaagccggcg
gaccggctggccttcgtgcggggcgagttccggaccaccgggaggtcggccaccccggag
gcgtgccaggcgctggtcgacgccatcggcagcgatctgcgggagctggcctcggcggtg
tcccagttggtcgcggacgtcgaggggacgatcgacgaggcggtcgtcgggcggtactac
accgggcgggccgaggcgtcgagcttcacggtcgccgaccgggcggtcgagggacgcgcg
gcggaggcgctggaggccctgcgctggtccctgtcgaccggggtggcgccggtgctgatc
accagtgcgctggcccagggcgtgcgggccatcgggaagctgcagtcggcgcgcggcggc
cggccgggcgacctggcccgtgagctgggcatgccgccgtggaagatcgaccgggtgcgg
cagcagatgcgcggctggaccccggacggcgtggccgtggcgctgcgcgcggtggccgag
gccgacgcgggagtgaagggcggcggggacgacccggagtacgccctggagaaggccgtc
gtcgcgatcgcccgggcggcccgctcacgaggccggggctga
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