Streptomyces viridosporus: CP969_15065
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Entry
CP969_15065 CDS
T07568
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
svd
Streptomyces viridosporus
Pathway
svd03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
svd00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CP969_15065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
svd03019
]
CP969_15065
03009 Ribosome biogenesis [BR:
svd03009
]
CP969_15065
Messenger RNA biogenesis [BR:
svd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CP969_15065
Ribosome biogenesis [BR:
svd03009
]
Eukaryotic type
Pre-60S particles
RNases
CP969_15065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
QEU85881
UniProt:
A0ABX6ADM5
LinkDB
All DBs
Position
3251113..3251715
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AA seq
200 aa
AA seq
DB search
MNDRMVWIDCEMTGLSLSDDALIEVAALVTDSELNVLGEGVDIVIRPPERALETMPEVVR
QMHTASGLLAELPDGTTLEDAEQQVLAYVQEHVKEPGKAPLCGNSVGTDRGFLLRDMPTL
EDYLHYRIVDVSSVKELARRWYPKAYFNSPEKNGNHRALADIRESIAELRYYREAVFVPQ
PGPDSDTAKKIAAKHVVPAQ
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatcgcatggtgtggatcgactgcgagatgaccggcctctcgctgtcggacgac
gcgctcatcgaggtggccgccctcgtcaccgactccgagctgaacgtcctcggtgagggc
gtggacatcgtcatccgcccgccggagcgggccctggagacgatgccggaggtggtgcgt
cagatgcacaccgcgtccgggctgctcgccgagctgccggacggcacgacgctcgaggac
gccgagcagcaggtcctcgcctatgtgcaagagcacgtcaaggagcccggcaaggctccc
ctgtgcggcaactccgtcggcacggaccgcggcttcctgctgcgggacatgccgacgctg
gaggactacctgcactaccgcatcgtggacgtgtccagcgtcaaggagctggcccgccgc
tggtacccgaaggcgtacttcaacagtcccgagaagaacggcaaccaccgcgccctcgcc
gacatccgcgagtccatcgcggagctgcgctactaccgggaggccgtcttcgtcccgcag
ccggggcccgactccgacaccgcgaagaagatcgccgcgaagcacgtcgtgcctgcccag
tag
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