Streptomyces viridosporus: CP969_16485
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Entry
CP969_16485 CDS
T07568
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
svd
Streptomyces viridosporus
Brite
KEGG Orthology (KO) [BR:
svd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
svd03021
]
CP969_16485
Transcription machinery [BR:
svd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CP969_16485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r4_2
HTH_23
Sigma70_ECF
HTH_Crp_2
HTH_24
MarR_2
HTH_3
GerE
HTH_28
HTH_31
DUF7343
MarR
KORA
NirdL-like_HTH
IF2_N
Motif
Other DBs
NCBI-ProteinID:
QEU89276
UniProt:
A0ABX6ANR6
LinkDB
All DBs
Position
3575278..3576192
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AA seq
304 aa
AA seq
DB search
MSPRLDASPTPKATSTLPPEHLDPIEQDDMTVVPDDLLAGLPDIPPYDEVGPVDARALSK
TLFERLEALEEGTLEYSYVRNTLVELNLALVKFAASRFRSRSEPMEDIIQVGTIGLIKAI
DRFEMSRGVEFPTFAMPTIIGEIKRFFRDTSWSVRVPRRLQELRLDLAKAGDELAQQLDR
APTVAELAERLGITNDEVVEGMAASNAYTASSLDAQPEEDDAEGALADRIGYEDHGLEGI
EYIESLKPLIAELPPRDRKILSLRFVAGMTQSEIGEELGISQMHVSRLLSRTLVKLRRGL
TVEE
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgtcaccccggctcgacgcctcgcctaccccgaaagcgacgtcgacactccctccggaa
catctggatcccatcgagcaggacgacatgaccgtcgtcccggacgacctactcgccgga
cttccggacatccccccgtacgacgaggtgggcccggtcgacgcacgggccctgtccaag
accctcttcgagcgcctggaagcgctggaggaaggcaccctcgagtactcgtacgtacgc
aatacgctcgtcgaactcaacctcgccctggtcaagttcgccgcctcccgtttccgctcg
cgcagcgagccgatggaggacatcatccaggtcggcaccatcggcctgatcaaggcgatc
gaccgcttcgagatgtcgcgcggtgtggagttccccacattcgcgatgccgaccatcatc
ggcgagatcaagcgcttcttccgcgacacctcctggtccgtgcgcgttccgcgccggctg
caggagctccggctcgacctggccaaggccggtgacgagctggcgcagcaactcgaccgc
gcgccgacggtggccgaactggccgagcgcctgggcatcaccaacgacgaggtcgtcgag
ggcatggccgcgtcgaacgcctacaccgcctcctcgctggacgcccagccggaggaggac
gacgccgagggcgcgctggccgaccggatcgggtacgaggaccacgggctcgaaggcatc
gagtacatcgagtcgttgaagccgctgatcgccgaactgccgccgcgggacaggaagatc
ctctccctgcgcttcgtcgcgggcatgacgcagtcggagatcggcgaggaactcggcatc
tcccagatgcacgtctcgcgcctgctgtcgcggacgctggtgaaactgcgcagggggctg
accgtcgaggagtga
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