Streptomyces viridosporus: CP969_19425
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Entry
CP969_19425 CDS
T07568
Name
(GenBank) PAS domain-containing protein
Organism
svd
Streptomyces viridosporus
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS
PAS_9
PAS_4
PAS_8
Diguanyl_cycl_sensor
Response_reg
Motif
Other DBs
NCBI-ProteinID:
QEU86609
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All DBs
Position
4178214..4182866
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AA seq
1550 aa
AA seq
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MSSRPSRGAARLAAILDALPDALVLVNANGTVVNANTIALEAFETPGTALVGRGLLDLLP
QFDSKLIPGSMRRPDHIDPRARTKPTRMIARRTDGSEFPVEVTSANLENGQQDYDTYGYT
GDELLMLVVRDLSGTVDTEAELARSQRQTEMILRAASEGVVGTDTDGRIVLVNPAAAQIL
GYRAGELGGRELHTLVLHSRADGSPFPYDESPLADTLRSGRKHRVRGQVLYAKSGDKLPV
DLTTAPVRDGDQLVGAVMTFLDRRPYDALVKEKEESERRHAEELERLAEEHGSELTALRQ
SHVTEMEELREQHAEQLAANEERYAALGEREKDRYEALAARHEQLLTLLGQSLRGPLEEL
RRELAALAADDAGQLWPEANQVLHHLSAGYSRITTLIDNVLGYQRLDTGAEGITRTKVML
DAVVAAGVDGAVELVGPGRVQFAVHAPPIEAEVDSRLLATALAHLVADVAGVDATGNTPV
STGGYLDNTVVVAAAQRGEVVRIEVRGPYSGGDPVHEPIVRGIVRAHGGVLQTHEVPGMS
GSAFVLEVPIGGGAGTVPATEAPAAPADEETAPADDAARSTGGGRRRARRASVDAFLESE
VAGAQQASDAEAAAPTGRRRRRAAAPDEPARPQLPVRTPGEDAVASGGTGRRRGRAAEDA
RAAAALEGAAAGVSEGAVVTAAEHAAGTAASNTGLGGTVPPQGVPTPSGRRARHGSGEQQ
ALPPALPAPSPGNGGPADAPQIAPVQEQPQPTGRRRRALAAATERAAAQEAAPRTVFALP
PAEADQGEQAGQTGQAEVLGRAAAPQEDGAPHASAPVPTAPGDAPVDDGRHDAVAHDQAD
DHTPPQPHPTSAPTGRRRRAAARPTEAPGTALPAPAPMPVQVPAQAGAAQAAPGEGAPAQ
WGAVPQQAMAVPPQVAPIPAQGAPVPPSGAVASSPGAPVPAQGAPVPAQGAPVAPSGTAV
PPQGAPVPPQGAPVPAQGTPVPAQGTPVPPSGATVPPQGAPVPPQGAPIPAQGAPVPPSG
TAVPPQGAPVPPQGAPVPSAVPPQGAPVPGQAPVAQPPAPAPAPAPAPPRAVPVAAEQQA
VAQPLPAEAPPGQGATPPNGTPAPQQWPAPGDASGAGAPLPPAPNPPQPTPSAGTPLPPE
GAPAPAQRAAQPLPAEAAVPVDPNSTQGRAISVRTLGQGVPFTRQAAQVQQPLPSATPPP
QQPGGSGRRRKLGTRPDAVAGAEQSARPHPSAEPAPARTPAPAPAPAQPQHSLGGQSRLA
PATEGTGRSYAIGAPDADAAEGPEPLDGPGGAVEVADTPRPQPMDDELPPEPLDNPRRLL
VWPAPDVSTQQALSDRGYRPVIVHSREEVDAQIAAFPAALFVDPLTGPITRTALQSLRQA
AVAAEVPVLVTAGLGQASRDAAYGADPAVLLKALAPRDSEQHPPRVLLIEEHAEIALALT
ATLERRGMQVARAGSDADAVALAGQFRPNLVVLDLMQVRRRQAGSAGIIDWLRANGQLNR
TPLVVYTAAVDQADLPRLASGETVLFLAERSTNDEVQARIVDLLARIGTN
NT seq
4653 nt
NT seq
+upstream
nt +downstream
nt
gtgagcagcaggccatcccgaggcgctgctcgcctcgcagccatactggacgcgcttccc
gacgccctggtgctggtcaacgccaacgggaccgtcgtcaacgcgaacaccatcgccctg
gaggccttcgagaccccgggcacggccctggtgggacgcgggctgctggacctgctgccg
cagttcgactccaagctcatcccggggtccatgcggcggcccgaccacatcgacccccgg
gcgcggaccaagccgacgcggatgatcgcccggcggaccgacgggagcgagttcccggtc
gaggtcaccagcgcgaacctggagaacggccagcaggactacgacacttacggctacacc
ggcgacgagctgctgatgctcgtcgtccgcgacctctccggcaccgtcgacaccgaggcg
gagctggcgcggtcgcagcggcagaccgagatgatcctgcgggccgcgtccgagggcgtc
gtggggaccgacaccgacggccggatcgtcctggtgaacccggccgccgcccagatactg
gggtaccgggccggcgagctcggcgggcgcgaactgcacacgctcgtcctgcactcgcgc
gccgacggctcccccttcccctacgacgagtccccgctcgccgacaccctgcgctccggg
cgcaagcaccgggtgcgcgggcaggtgctgtacgccaagagcggcgacaagctcccggtc
gacctgaccaccgcgccggtgcgcgacggcgaccagctcgtcggcgccgtcatgaccttc
ctcgaccggcgcccctacgacgcgctcgtcaaggagaaggaggagagcgagcggcggcac
gccgaggagctggagcgcctcgccgaggagcacggctccgagctcaccgccctgcgccag
agccacgtcaccgagatggaggagctgcgcgagcagcacgcggagcaactcgccgccaac
gaggagcggtacgccgccctcggcgagcgggagaaggaccgctacgaggccctcgccgcc
cggcacgaacaactgctcaccctgctcgggcagtccctgcggggaccgctggaggaactg
cgccgcgagctggccgcgctggccgcggacgacgccgggcagctgtggcccgaggccaac
caggtgctccaccacctgtcggccggctactcccgcatcaccaccctcatcgacaacgtc
ctcggctaccagcgcctcgacaccggggccgagggcatcacccggacgaaggtgatgctc
gacgccgtcgtcgccgccggcgtggacggggccgtggagctcgtcgggcccggccgggtg
cagttcgccgtgcacgcgccgcccatcgaggccgaggtcgactcccggctgctcgcgacc
gccctcgcgcacctcgtcgcggacgtcgcgggcgtcgacgcgaccggcaacacccccgtc
tcgacgggcgggtacctggacaacacggtcgtggtcgcggcggcgcagcgcggtgaggtc
gtccgcatcgaggtgcgcgggccgtacagcggcggcgacccggtgcacgagccgatcgtg
cgcgggatcgtccgggcgcacggcggcgtgctgcagacgcacgaggtgccggggatgagc
ggcagcgcgttcgtcctggaagtgccgatcgggggcggggcggggaccgtcccggccacc
gaggcacccgccgcgccggcggacgaggagaccgctccggccgatgacgccgcgcggtcc
accggtggtggacggcgacgggcacggcgtgcctccgtggacgccttcctggagagcgag
gtggcgggcgcgcagcaggcctccgatgcggaggccgcggcgcccaccgggcggcgcagg
cgccgggcggccgcccccgacgagcccgcgcggccgcagcttccggtccggacgcccggc
gaggacgcggtggcctccggcggtaccggacggcggcgcgggcgggcggccgaggacgca
cgggcggccgccgcgctcgagggcgccgctgctggggtgtccgagggggccgtcgtcacg
gccgccgagcacgcggcggggaccgccgcgtcgaacaccgggctgggcgggaccgtaccg
ccgcagggggtgcccacgccctccggacggcgtgcccggcacgggtccggcgagcagcag
gccctgccgccggcgctgcccgcgccgtcccccgggaacggtgggccggccgacgcgccc
cagatcgccccggtccaggagcagccgcagccgacggggcggcgccggcgtgcgctggcc
gccgccaccgagcgcgcggcggcgcaggaggccgcgccccgtacggtgttcgcgctgccg
cccgccgaggcggaccagggagagcaggccgggcagaccgggcaggccgaggtgctcggc
cgggccgcggccccgcaggaggacggggcgcctcacgcgagcgcgcccgtgccgaccgct
cccggtgacgccccggtcgacgacgggcgccatgacgccgtcgcgcacgaccaggccgac
gaccacaccccgccgcagccgcatcccaccagcgcgcccacgggccgccgccgacgggcc
gccgcccggccgacggaggcccccgggacggccctgcccgcacccgcgcccatgcccgtg
caggtaccggcccaggcgggtgcggcgcaggctgctcccggggagggcgctccggcgcag
tggggggccgtgcctcagcaggcgatggccgttccgccgcaggtcgctccgattccggcg
cagggcgcacccgttcccccgagcggagcggtcgcctcatcgccgggcgctccggttccg
gcgcagggtgctccggttccggcccagggcgctcccgttgccccgagtgggacggccgtc
ccgccgcagggtgcccccgtgccgccgcagggtgctccggttccggcccagggcactccc
gttccggcccaaggcactcccgttcccccgagcggggcgactgtcccgccgcagggtgcc
cccgtgccaccacagggtgctccgattccggcccaaggcgctcccgttcccccgagcggg
acggccgtcccgccccagggagctccggtcccaccgcagggcgcccccgttccgtcggcc
gttcccccgcagggtgcgcccgtgcccgggcaggcgccggtggcccagccgccggcaccc
gcaccggcaccggcaccggcaccgccccgggccgtccccgtcgccgccgagcagcaggcc
gtcgcccagccgcttcccgccgaggcgcccccgggtcagggggccactccgccgaacggc
accccggccccgcagcagtggcccgcccccggagacgcctccggcgccggtgcgcccctc
ccccctgccccgaacccgccgcagccgaccccctccgccggcacgccgctgcctcccgag
ggcgctccggcgccggcgcagcgggccgcccagccgttgcccgccgaggccgcggtgccg
gtggacccgaactccacgcaggggcgggcgatcagcgtgcggacgctgggccagggcgtg
ccgttcacccggcaggccgctcaggtccagcagccgctgccgtcggccacgccgcccccg
cagcagccgggcggttcgggccgccgccgcaagctcggcacgcgtcccgacgcggtcgcg
ggcgccgagcagagcgcgcgtccgcacccgtcggccgagcccgcccccgcccggacaccg
gcaccggctcccgcgccggcccagccccagcactcgctcggcgggcagtcccggctcgcg
ccggccaccgagggcaccgggcgttcctacgccataggcgcgccggacgcggacgccgcc
gaggggcccgagccgctggacggcccgggcggtgccgtcgaggtggcggacacgccgcgt
ccgcagccgatggacgacgaactgccgccggaaccgctggacaacccgcgccggctgctc
gtgtggcccgcgccggacgtctccacgcagcaggcgctgagcgaccgcggctaccggccg
gtgatcgtgcactcgcgcgaggaggtcgacgcgcagatcgcggcgttccccgccgcgctg
ttcgtggacccgctgaccggtccgatcacccgcacggccctgcagtcgctgcggcaggcg
gcggtggccgccgaggtgccggtgctggtcacggccggactcgggcaggcctcgcgggac
gcggcctacggcgccgaccccgccgttctgctgaaggcgctcgcgccgcgggacagcgag
cagcacccgccgcgggtgctgctgatcgaggagcacgcggagatcgcgctggcgctcacc
gcgacgctggagcggcgcggcatgcaggtggcacgggccgggagcgacgccgacgcggtg
gcgctggcggggcagttccggccgaacctggtggtgctggacctgatgcaggtgcggcgg
cggcaggccgggtccgccgggatcatcgactggctgcgggcgaacgggcagctcaaccgc
accccgctggtcgtctacaccgccgccgtcgaccaggccgacctgccgcggctggcgtcc
ggcgagacggtgctgttcctcgcggagcggtccaccaacgacgaggtgcaggcccggatc
gtcgacctgctcgcgcggatcggcaccaactga
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