Streptomyces viridosporus: CP969_23230
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Entry
CP969_23230 CDS
T07568
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
svd
Streptomyces viridosporus
Pathway
svd03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
svd00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CP969_23230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
svd03021
]
CP969_23230
03400 DNA repair and recombination proteins [BR:
svd03400
]
CP969_23230
Enzymes [BR:
svd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CP969_23230
Transcription machinery [BR:
svd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CP969_23230
DNA repair and recombination proteins [BR:
svd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CP969_23230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
QEU87262
LinkDB
All DBs
Position
4972764..4973786
Genome browser
AA seq
340 aa
AA seq
DB search
MLIAQRPSLTEEVVDEFRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTDLILNIKQLVVSSEHDEPVVMYLRKQGPGLVTAADIAPPAGVEVHN
PDLVLATLNGKGKLEMELTVERGRGYVSAVQNKQVGQEIGRIPVDSIYSPVLKVTYKVEA
TRVEQRTDFDKLIVDVETKQAMRPRDAMASAGKTLVELFGLARELNIDAEGIDMGPSPTD
AALAADLALPIEELELTVRSYNCLKREGIHSVGELVARSEADLLDIRNFGAKSIDEVKAK
LAGMGLALKDSPPGFDPTAAADAFGADDDADAGFVETEQY
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgctgatcgctcagcgtccctcgttgaccgaagaggtcgtcgacgaattccgctcccgg
ttcgtgatcgagccgctggagccgggcttcggctacaccctcggcaactccctccgccgc
accctcctgtcgtcgatccccggtgccgccgtcaccagcatccgcatcgacggcgtcctg
cacgagttcaccaccgtgccgggcgtcaaggaggacgtcaccgacctgatcctcaacatc
aagcagctggtcgtctcctcggagcacgacgagccggtcgtgatgtacctgcgcaagcag
ggcccgggtctggtcaccgccgccgacatcgcgccgccggccggtgtcgaggtgcacaac
cccgacctcgtcctcgccacgctcaacggcaagggcaagctggagatggagctgaccgtg
gagcgcggtcgcggctacgtctccgccgtgcagaacaagcaggtgggtcaggagatcggc
cggatcccggtcgactcgatctactcgccggttctcaaggtcacctacaaggtcgaggcg
acccgtgtcgagcagcgcaccgacttcgacaagctgatcgtcgacgtcgagaccaagcag
gccatgcgtccgcgcgacgccatggcgtcggccggcaagacgctggtcgagctgttcggt
ctggcccgcgagctcaacatcgacgccgagggcatcgacatgggcccgtccccgacggac
gccgccctcgccgccgacctggcgctgccgatcgaggagctggagctcaccgttcggtcg
tacaactgcctcaagcgcgagggcatccactccgtgggtgagctcgtcgcccgctccgag
gccgacctcctcgacatccgcaacttcggtgcgaagtcgatcgacgaggtcaaggcgaag
ctggccggcatgggcctcgccctcaaagacagcccgcccggtttcgacccgacggccgcc
gcggacgccttcggcgccgacgacgacgcggacgccgggttcgtcgagaccgagcagtac
tga
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