Streptomyces viridosporus: CP969_25620
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Entry
CP969_25620 CDS
T07568
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
svd
Streptomyces viridosporus
Brite
KEGG Orthology (KO) [BR:
svd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
svd03021
]
CP969_25620
Transcription machinery [BR:
svd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CP969_25620
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
DUF7343
Sigma70_ECF
HTH_24
MarR_2
NirdL-like_HTH
MarR
IF2_N
HTH_3
HTH_Crp_2
HTH_AraC
GerE
Motif
Other DBs
NCBI-ProteinID:
QEU89448
LinkDB
All DBs
Position
complement(5509012..5510136)
Genome browser
AA seq
374 aa
AA seq
DB search
MRDEERGTRELPAERVPDGIDGIPEQARPHPEDDAVEAGSTGGGQPGGAARGTPPGGSAG
VAPGHGDAPARAKPAAGDEASARGRATTGGTMSEHERHAEDEAPRAPSARGAGSTPGPRN
AHDAQDRSGARAMFLELRSLQDGSPEYAELRNQLVRMHLPLVEHLARRFRNRGEPLDDLT
QVATIGLIKSVDRFDPDRGVEFSTYATPTVVGEIKRHFRDKGWAVRVPRRLQELRLALTT
ATAELSQLHGRSPTVHELAEKLAISEEEVLEGLESANAYSTLSLDVPDTDDESPAVADTL
GAEDEALEGVEYRESLKPLLEDLPPREKRILLLRFFGNMTQSQIAQEVGISQMHVSRLLA
RTLAQLREKLLVEE
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
gtgcgggacgaagaacgcggcacaagggagctgccggccgagcgcgtgccggacggcatc
gacggcatccccgagcaggcccggccacacccggaggacgacgccgtggaggccggctcc
acgggcggcgggcagcccggcggtgccgcacggggcacgcctccgggcggatcggccggg
gtcgctcccggccacggggacgcccccgcccgagcgaagccggcggcgggggacgaggcg
agcgctcggggaagggcgacgacgggcgggacgatgagcgagcacgagcgacacgccgag
gacgaggcgccgcgggcgccgagcgcccggggcgccggaagcacaccgggcccccggaac
gcacacgacgcgcaggaccgcagcggggcgcgcgccatgttcctcgagctgcgctcgctg
caggacggcagccccgagtacgcggaactgcgcaaccagctggtccgcatgcatctgccg
ctcgtcgagcacctcgcgcgccgcttccgcaaccgcggcgaaccgctggacgacctgacc
caggtcgccaccatcgggctgatcaagtcggtcgaccgcttcgacccggaccgcggcgtg
gagttctcgacgtacgcgaccccgacggtcgtcggcgagatcaagcggcacttccgcgac
aagggctgggcggtgcgcgtaccgcgccggctgcaggagctgcgcctggcgctgacgacg
gccacggccgagctctcgcagctgcacggccgctcccccacggtccacgagctggccgag
aagctggccatctcggaggaggaggtcctggagggcctggagtccgccaacgcgtactcc
acgctgtccctggacgtccccgacaccgacgacgagtccccggcggtcgccgacaccctc
ggcgccgaggacgaggcgctggagggcgtggagtaccgggagtcgctcaagcctctgctg
gaggatctgccgccgcgcgagaagcggatcctgctgctgcgcttcttcggcaacatgacc
cagtcgcagatcgcgcaggaggtcggcatctcgcagatgcacgtctcccggctgctggcc
cgcaccctggcccagctgcgggagaaactgctcgtggaggagtga
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