Streptomyces viridosporus: CP969_25875
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Entry
CP969_25875 CDS
T07568
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
svd
Streptomyces viridosporus
Pathway
svd03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
svd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
CP969_25875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
svd03400
]
CP969_25875
DNA repair and recombination proteins [BR:
svd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
CP969_25875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
QEU87725
LinkDB
All DBs
Position
5561527..5562558
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AA seq
343 aa
AA seq
DB search
MLHVRSIWNGVISFGLVRIPIKLVNATESRAVPFREIHTEDGGRIRHRKFCELEDREVTA
REISRGYEESDGTIIPITDEDLSRLPIPTAKTIEIVTFVPEEQIDPLQMGAAYYLAAGRA
PAARPYALLREALRRSNKVAVAKFALRGRERLGMLRVVGDTIALHGLLWPDEVRAPDGLA
PGADVAVHDRELDLAGALMDALGEVGLEGLRDEYREAVEEVVAAKISGEALPEPPEPERT
GRILDLVTALERSVQAVRESRGGEAGGPARAGGGRLPSRGTPRAAPEETGGGKSTSAAKK
KAASKTAAGAGKDAKRATAKRAAKKAHAQKTQEKRAASRRPSV
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
gtgctgcacgtgagatccatctggaacggcgtgatctcgttcggcctggtcagaattccg
atcaagctcgtgaacgccaccgagagccgcgcggttcccttccgcgagatccacacggag
gacggcggccggatccgccaccgcaagttctgcgagctggaggaccgcgaggtcaccgct
cgggagatcagcaggggctacgaggaatcggacggcacgatcatcccgatcaccgacgag
gacctgtcccgcctgccgatccccaccgccaagaccatcgagatcgtcaccttcgtcccc
gaggagcagatcgacccgctccagatgggcgccgcgtactacctggcggcgggccgggcg
ccggccgcccggccgtacgcgctcctgcgggaggcgctgaggcgcagcaacaaggtggcc
gtcgcgaagttcgcgctgcggggccgtgaacgcctgggcatgctccgcgtggtcggcgac
acgatcgccctgcacggcctgctctggcccgacgaggtccgcgctcccgacgggctcgcc
cccggcgcggacgtcgccgtccacgacagggagctggacctcgcgggcgccctgatggac
gccctcggcgaggtcggcctggagggcctgcgcgacgagtaccgcgaggcggtggaggag
gtcgtcgccgccaagatctccggcgaggccctgcccgaaccgcccgagccggagcgcacc
ggcaggatcctggacctggtgacggccctggagaggagcgtccaggcggtccgggagtcc
cgcggcggggaggcgggcggaccggcccgggccgggggcgggcggttgccgtcgcgcggg
acgccccgcgcggctcccgaggagaccggtggcggaaagtcgacgtccgcggcgaagaag
aaggcggcgtcgaagacggccgccggggcggggaaggacgcgaagagggcgacggcgaag
agggcggccaagaaggcccacgcgcagaagacccaggagaagagggcggcctcccgcagg
ccctccgtctga
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