Streptomyces viridosporus: CP969_27555
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Entry
CP969_27555 CDS
T07568
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
svd
Streptomyces viridosporus
Pathway
svd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
svd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CP969_27555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
svd03019
]
CP969_27555
03016 Transfer RNA biogenesis [BR:
svd03016
]
CP969_27555
Enzymes [BR:
svd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CP969_27555
Messenger RNA biogenesis [BR:
svd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CP969_27555
Transfer RNA biogenesis [BR:
svd03016
]
Prokaryotic type
tRNA degradation factors
CP969_27555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH-I_KHDC4-BBP
DUF2017
KH_2
KH_KhpA-B
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
QEU88030
LinkDB
All DBs
Position
5947855..5950074
Genome browser
AA seq
739 aa
AA seq
DB search
MENETHYAEAVIDNGSFGTRTIRFETGRLARQAAGSAVAYLDDDTMVLSATTASKNPKDQ
LDFFPLTVDVEERMYAAGRIPGSFFRREGRPSEDAILTCRLIDRPLRPSFKKGLRNEIQV
VATIMALNPDHLYDVVAINAASASTQLAGLPFSGPIGGVRVALIRGQWVAFPTHTELEDA
VFDMVVAGRTLEDGDVAIMMVEAEATEKTVKLVEGGAEAPTEEVVAAGLEAAKPFIKVLC
RAQADLAAKAAKPTAEFPIFLDYQDDVLEALTAAVKPELAQALTIAGKQEREAELDRVKA
LAAEKLLPEFEGREKEISAAYRSLTKSLVRERVIKEKKRIDGRGVTDIRTLAAEVEAIPR
VHGSALFERGETQILGVTTLNMLRMEQQLDTLSPVTRKRYMHNYNFPPYSTGETGRVGSP
KRREIGHGALAERALVPVLPSREEFPYAIRQVSEALGSNGSTSMGSVCASTMSLLNAGVP
LKAPVAGIAMGLISQEIEGETHYVTLTDILGAEDAFGDMDFKVAGTKDFVTALQLDTKLD
GIPASVLAAALKQARDARLHILDVMMEAIDRPDEMSPHAPRIITVKIPVDKIGEVIGPKG
KMINQIQEDTGAEITIEDDGTIYIGAADGPSAEAARTTINGIANPTMPEVGERYLGTVVK
TTTFGAFVSLLPGKDGLLHISQIRKLAGGKRVENVEDVLGVGQKVQVEIAEIDSRGKLSL
VPVIEDEEGSEEQKDDADK
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
gtggagaacgagacccactacgccgaggccgtcatcgacaacggctccttcggcacccgc
accatccgcttcgagacgggccgcctcgcccggcaggccgccggctccgccgtggcctac
ctggacgacgacaccatggtgctgtcggccaccaccgcctccaagaaccccaaggaccag
ctcgacttcttcccgctcacggtggacgtcgaggagcggatgtacgcggccggccggatc
cccggctccttcttccgccgtgagggccggccctccgaggacgcgatcctcacctgccgc
ctcatcgaccgcccgctgcgcccgtccttcaagaagggcctgcgcaacgagatccaggtc
gtcgccacgatcatggcgctcaaccccgaccacctgtacgacgtcgtggcgatcaacgcc
gcctccgcgtccacgcagctggccggcctgcccttctccggcccgatcggcggcgtccgc
gtcgcgctgatccgcggtcagtgggtcgccttcccgacgcacaccgagctcgaggacgcc
gtcttcgacatggtcgtcgcgggccgcaccctggaggacggcgacgtcgcgatcatgatg
gtcgaggccgaggccaccgagaagaccgtcaagctggtcgagggcggcgccgaggcaccc
accgaggaggtcgtggccgccggtctggaggccgcgaagcccttcatcaaggtgctgtgc
cgcgcccaggccgacctcgccgcgaaggccgccaagccgaccgccgagttcccgatcttc
ctggactaccaggacgacgtcctcgaggcgctgaccgccgccgtcaagcccgagctcgcc
caggcgctcaccatcgccggcaagcaggagcgcgaggccgagctggaccgcgtcaaggcg
ctcgccgccgagaagctcctgccggagttcgagggccgcgagaaggagatctccgccgcg
taccgttcgctgaccaagtccctggtccgcgagcgcgtcatcaaggagaagaagcgcatc
gacggccgcggtgtcaccgacatccgcaccctggccgccgaggtcgaggccatcccgcgg
gtgcacggctcggcgctgttcgagcgcggcgagacccagatcctgggcgtcaccaccctc
aacatgctccgcatggagcagcagctggacaccctctccccggtgacccgcaagcgctac
atgcacaactacaacttcccgccgtactccaccggcgagaccggccgcgtcggctccccg
aagcgccgcgagatcggccacggggccctcgccgagcgcgccctggtcccggtcctgccc
tcgcgcgaggagttcccctacgcgatccgccaggtgtccgaggccctcggctccaacggc
tcgacgtccatgggctcggtctgcgcctccaccatgtcgctgctgaacgccggtgtgccg
ctcaaggccccggtcgccggtatcgccatgggcctgatctcccaggagatcgagggcgag
acccactacgtcaccctcaccgacatcctcggtgcggaggacgccttcggcgacatggac
ttcaaggtcgccggcaccaaggacttcgtgaccgccctccagctcgacaccaagctggac
ggcatccccgcctccgtcctcgccgcggccctcaagcaggcccgcgacgcccgccttcac
atcctcgacgtgatgatggaggccatcgaccggcccgacgagatgtccccgcacgccccg
cggatcatcaccgtcaagatcccggtcgacaagatcggcgaggtcatcggccccaagggc
aagatgatcaaccagatccaggaggacaccggcgccgagatcaccatcgaggacgacggc
accatctacatcggtgccgccgacggcccctccgccgaggccgcccgcaccacgatcaac
ggcatcgccaacccgacgatgcccgaggtcggcgagcgctacctgggcacggtcgtgaag
acgacgacgttcggcgccttcgtctccctcctccccggcaaggacggcctgctgcacatc
tcgcagatccgcaagctggccggcggcaagcgcgtggagaacgtcgaggacgtcctcggc
gtgggccagaaggtccaggtcgagatcgccgagatcgactcccgcggcaagctctccctg
gtccccgtgatcgaggacgaggaaggttccgaagagcagaaggacgacgccgacaagtga
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