Streptomyces viridosporus: CP969_27640
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Entry
CP969_27640 CDS
T07568
Name
(GenBank) HAMP domain-containing protein
Organism
svd
Streptomyces viridosporus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAMP
HAMP_2
HATPase_c
Response_reg
HisKA
GAF_2
GAF
DUF4795
HAUS-augmin3
RNase_Y_N
Nup49_C
ATG14
OKR_DC_1_N
bHLH-MYC_N
OmpH
Motif
Other DBs
NCBI-ProteinID:
QEU88041
UniProt:
A0ABX6AK24
LinkDB
All DBs
Position
5967467..5972962
Genome browser
AA seq
1831 aa
AA seq
DB search
MESGAATRGTKARAKGGQSLSNPRKAKGGTTVVDTAALNRLLVALVAMRDGNFRKRLTVS
GDGVMSEIAAVFNEVADRNLHLTGELARVRRMVGREGKLTERLETGASVGSWATAIEHSN
ALVDDLVRPVSEVSRVLSAVAEGDLSPRMELRAQAPDGTGHPLRGEFLKVGRTVNNLVDQ
LSTFTDEVTRVASEVGTEGKLGGQARVRGMSGSWKDLTDSVNTMAERLTAQVRDIALVTT
AVARGDLSRKVTVHVEGEMLELKNTVNTMVDQLSAFSSEVTRVAREVGTEGALGGQAQVP
GVDGVWKELTDSVNTMAGNLTAQVREIAEVTTAVANGDLSRQVTVPARGEVAQLAKTINQ
MTETLRIFADEVTRVANEVGAEGRLGGQANVPGAAGTWKDLTDSVNTVFRNLTTQVRDIA
AVTTAVANGDLSQKVTVDVAGEMLELKNTVNTMVDQLSAFGAEVTRVAREIGVEGELGGQ
AQVPGAAGTWKDLTDSVNTAFRNLTGQVRNIAQVTTAVANGDLSQKVTVDVSGEMLQLKN
TVNTMVDQLSSFADQVTRMARDVGTEGRLGGQARVDGVSGTWKELTDSVNSMAGNLTAQV
RGIAEVTTAVARGDLSQKIDVDARGEILELKNTINTMVDQLSSFADQVTRVAREVGTEGR
LGGQAQVPGVAGVWRDLTDSVNGMAGNLTAQVRNIAQVATAVARGDLSQKITVDARGEIL
ELKNTLNTMVDQLSSFAQEVTRVAREVGTEGILGGQAEVQGVSGTWKDLTQSVNGMANNL
TLQVRNIAEVTTAVAKGDLSKKITVDAKGEILELVTTVNTMVDQLSSFAEQVTRVAREVG
TEGILGGQANVPGVTGIWKDLSDNVNLMAKNLTTQVRNISQVSAAVANGDLTRQVSIEAR
GEVAQLADTINTMVKTLSAFAEQVTKVAREVGTDGILGGQAQVPGVAGTWKDLTESVNQM
ASNLTGQVRNIAMVTTAIAKGDLTKKIDIDARGEILELKTTINTMVDQLSSFAEEVTRVA
REVGTEGQLGGQARVRDVDGTWRDLTESVNEMAGNLTRQVRAIARVATAVTRGDLNLKID
VDASGEIQELQDYINKMIANLRDTTIANKEQDWLKGNLARISALMQGRRDLEDVASLIMS
ELTPVVSAQHGAFFLAMPLVDGEDVSDADDDQFELRMLGSYGYSMGSMPTSFRPGEGLIG
TAAVEKRTILVENAPTGYLKISSGLGEAPPAQVIVLPVLFEGKVLGVVELASFTPFTAIQ
KDFLNQIAEMIATSVNTISVNTKTERLLKQSQELTEQLRERSAELEQRQKALQASNAELE
EKAELLARQNRDIEVKNTEIEEARQVLEERAEQLAVSMRYKSEFLANMSHELRTPLNSLL
ILAKLLADNAEGNLSPKQVEFAETIHGAGSDLLQLINDILDLSKVEAGKMDVSPTRIALV
QLVDYVEATFRPLTAEKGLDLSVRVSPELPATLHTDEQRLLQVLRNLLSNAVKFTDSGSV
ELVIRPARDDVPQAIREQLLEAGSLTDPDADLIAFSVSDTGIGIAASKMRVIFEAFKQAD
GTTSRKYGGTGLGLSISREIAQLLGGEIHAQSEPGRGSTFTLYLPLHPSELPPHGYQQAL
PAPETGGLVAPAGPEAGAPAEVTSYRETQSGPAALFRRRRRALPRAEQRPAPEQRPAPEQ
RPAPEPEQWSGAEQPEPAPRSHRGIRFGGQKVLIVDDDIRNVFALTSVLEQHGLSVLYAE
NGREGIEVLEQHDDVAVVLMDIMMPEMDGYATTTAIRRMPQFAGLPIIALTAKAMKGDRE
KAIESGASDYVTKPVDPDHLLSVMEQWMRGE
NT seq
5496 nt
NT seq
+upstream
nt +downstream
nt
gtggagtctggcgcagcgacgcggggcacgaaggcgcgcgcgaaaggcggacagtccctg
agcaacccacgcaaggcgaagggcgggaccacggtggtggacacggcggccctgaatcgg
ctgctggtggctctcgtggcgatgcgggacgggaacttccgcaagcggctcacggtgtcc
ggcgacggtgtgatgtcggagatcgcggcggtcttcaacgaggtggccgaccgcaatctg
cacctgacgggtgagctggcgcgggtgcggcgcatggtcggacgtgagggaaagctcacc
gagcggctggagacgggggcctccgtgggctcctgggcgaccgcgatcgagcactcgaac
gcgctggtggacgatctcgtgcggccggtgtccgaggtcagccgggtgctgtccgcggtg
gccgagggcgatctgtcgccgcgcatggagctgcgggcccaggcgccggacgggaccggg
cacccgctgcgcggtgagttcctgaaggtcgggcgcaccgtcaacaacctggtcgaccag
ttgtcgacgttcaccgacgaggtcacgcgcgtggccagcgaggtgggtaccgagggcaag
ctgggcgggcaggcccgggtgcgcggcatgtccggttcgtggaaggacctcacggactcc
gtcaacaccatggcggagcggctgacggcgcaggtgcgcgacatcgcgctggtgacgacg
gcggtcgcccgcggcgacctgtcgcgcaaggtcaccgtgcacgtcgagggggagatgctg
gagctgaagaacaccgtcaacacgatggtggaccagctctccgcgttctcctccgaggtg
acccgggtcgcgcgcgaggtgggcaccgagggcgcgctgggcggtcaggcgcaggtgccc
ggggtggacggcgtctggaaggagctcaccgactccgtcaacaccatggccgggaacctc
acggcgcaggtgcgcgagatcgccgaggtgacgaccgcggtcgccaacggggacctgtcg
cggcaggtgaccgtgccggcgcgcggcgaggtcgcgcagctggccaagacgatcaaccag
atgaccgagacgctgcggatcttcgcggacgaggtcacgcgggtcgccaacgaggtcggc
gccgagggccggctgggcggtcaggcgaacgtgccgggcgccgcgggcacctggaaggac
ctgacggactccgtcaacacggtgttccggaacctgaccacccaggtgcgggacatcgcc
gcggtgacgacggcggtggccaacggcgacctgtcgcagaaggtcaccgtggacgtggcc
ggcgagatgctggagctgaagaacaccgtcaacacgatggtggaccagctgtccgccttc
ggtgccgaggtcacgcgcgtggcgcgcgagatcggggtcgagggcgagctgggcggccag
gcgcaggtgccgggggcggcggggacgtggaaggacctgacggactccgtcaacacggcg
ttccgcaacctcaccggacaggtgaggaacatcgcccaggtgacgacggcggtggccaac
ggcgacctgtcgcagaaggtcacggtcgacgtgtccggcgagatgctccagctgaagaac
accgtgaacacgatggtggaccagctgtcgagcttcgccgaccaggtcacgcggatggcc
cgggacgtgggcacggagggccgcctgggcggccaggcccgggtggacggggtgtcgggc
acctggaaggagctcaccgactccgtcaactcgatggccgggaacctcacggcccaggtg
cgcggcatcgccgaggtgacgacggccgtcgcgcgcggtgacctgtcgcagaagatcgac
gtcgacgcgcgcggggagatcctcgagctgaagaacaccatcaacacgatggtcgaccag
ctgtcgtccttcgccgaccaggtcacccgcgtggcgcgcgaggtgggcaccgagggccgg
ctcggcggccaggcgcaggtgccgggggtcgccggtgtgtggcgggacctgaccgactcc
gtgaacggcatggccggcaatctcaccgcgcaggtgcgcaacatcgcccaggtggccacc
gcggtggcccgcggcgacctgtcgcagaagatcaccgtggacgcgcgcggggagatcctg
gagctgaagaacacgctgaacacgatggtggaccagctgtcgtcgttcgcccaggaggtc
acgcgggtggcccgtgaggtgggtacggagggcatcctcggcggccaggccgaggtgcag
ggcgtctccggcacctggaaggacctcacgcagtcggtgaacggcatggcgaacaacctg
accctccaggtgcgcaacatcgccgaggtcaccaccgcggtcgccaagggcgacctgtcg
aagaagatcaccgtcgacgccaagggcgagatcctcgagctggtcaccaccgtcaacacg
atggtggaccagctgtcgtcgttcgccgagcaggtgacccgggtggcccgcgaggtgggc
acggagggcatcctcggcggtcaggccaacgtgccgggcgtgacgggcatctggaaggac
ctgagcgacaacgtcaacctgatggccaagaacctgaccacccaggtgcggaacatctcc
caggtctccgccgccgtcgccaacggcgacctgacgcggcaggtcagcatcgaggcgcgc
ggcgaggtggcgcagctcgccgacaccatcaacaccatggtgaagacgctgagcgcgttc
gccgagcaggtcaccaaggtggcccgcgaggtgggcacggacggcatcctcggcggtcag
gcgcaggtgccgggtgtggccggcacgtggaaggatctcaccgagtcggtgaaccagatg
gcgtccaacctgaccggtcaggtgcgcaacatcgccatggtgaccacggccatcgccaag
ggcgacctgacgaagaagatcgacatcgacgcgcgcggggagatcctcgagctgaagacg
accatcaacacgatggtcgaccagctgtcctcgttcgcggaggaggtcacgcgagtggcc
cgcgaggtggggacggagggccagctgggcggccaggcgcgggtgcgtgacgtcgacggc
acctggcgggacctgaccgagtccgtgaacgagatggccgggaacctgacccggcaggtg
cgtgccatcgcgcgcgtggcgaccgcggtgacccgcggcgatctgaacctgaagatcgac
gtggacgcgtccggggagatccaggagctccaggactacatcaacaagatgatcgccaac
ctgcgcgacaccacgatcgccaacaaggagcaggactggctcaagggcaatctcgccagg
atctccgcgctgatgcagggccgccgcgacctggaggacgtggcctcgctgatcatgagc
gagctgacgccggtggtctccgcgcagcacggcgcgttcttcctggcgatgccgctggtc
gacggcgaggacgtgagcgacgcggacgacgaccagttcgagctgcgcatgctcggctcg
tacggctactccatgggctccatgccgacgtcgttccggcccggcgaggggctcatcggg
acggcggccgtggagaagcgcacgatcctcgtggagaacgcgcccaccggttacctgaag
atctcctcggggctcggggaggcgccgccggcgcaggtgatcgtgctgccggtgctgttc
gaggggaaggtgctcggcgtcgtcgagctggcgtcgttcacgccgttcacggcgatccag
aaggacttcctgaaccagatcgccgagatgatcgcgacgagcgtcaacaccatctcggtc
aacaccaagacggaacggctgctgaagcagtcccaggagctgaccgagcaactgcgggag
cggtcggcggagttggagcagcggcagaaggcgctccaggcgtccaacgccgaactggag
gagaaggccgagctgctggcgcggcagaaccgcgacatcgaggtgaagaacaccgagatc
gaggaggcgcggcaggtcctggaggagcgggccgagcagctcgcggtctccatgcgctac
aagagcgagttcctggccaacatgtcgcacgagctgcggacgccgctcaactcgctgctg
atcctggccaagctgctcgccgacaacgcggaggggaacctctccccgaagcaggtcgag
ttcgccgagaccatccacggtgccgggtccgacctgctccagctcatcaacgacatcctc
gacctgtccaaggtcgaggcgggcaagatggacgtctccccgacgcgcatcgcgctggtc
cagctcgtggactacgtggaggcgaccttccggccgctgaccgcggagaagggcctggac
ctgtcggtgcgcgtgtccccggagctgccggccaccctgcacaccgacgagcagcggctg
ctccaggtgctgcggaacctgctgtccaacgcggtgaagttcaccgactccggatcggtc
gagctggtcatccggccggcccgggacgacgtcccgcaggccatccgggagcagttgctg
gaggccggttcgctgaccgacccggacgcggacctgatcgcgttctcggtgagcgacacg
ggcatcggcatcgcggccagcaagatgcgggtgatcttcgaggcgttcaagcaggccgac
ggcacgaccagccgcaagtacggcggcacgggtctggggctgtccatctcgcgggagatc
gcgcagctcctcggcggtgagatccacgcgcagagcgagccgggccgcggctcgacgttc
acgctgtacctccccctgcacccgagcgagttgcccccgcacggctaccagcaggccctg
cccgccccggagaccggtggcctggtggcaccggccgggccggaggccggggcgcccgcc
gaggtgacgtcgtaccgggagacccagagcggtccggccgcgttgttccggcgccgtcgc
cgggccctgccccgggcggagcagcggcccgctccggagcagcggcccgcgccggagcag
cggcccgcgccggagccggagcagtggtcgggcgcggagcagccggagccggcgccccgg
tcgcaccggggcatccgcttcggcgggcagaaggtgctgatcgtcgacgacgacatccgc
aacgtcttcgcgctcaccagcgtgctggagcagcacggcctgtccgtgctgtacgcggag
aacgggcgcgagggcatcgaggtgctggagcagcacgacgacgtggcggtggtgctgatg
gacatcatgatgcccgagatggacgggtacgcgacgaccacggcgatccgccggatgccg
cagttcgccgggctcccgatcatcgcgctcaccgcgaaggcgatgaagggcgaccgggag
aaggcgatcgagtcgggcgcctccgactacgtgaccaagccggtcgaccccgaccacctg
ctgtcggtgatggagcagtggatgcggggggagtga
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