Streptomyces viridosporus: CP969_27990
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Entry
CP969_27990 CDS
T07568
Name
(GenBank) type IIA DNA topoisomerase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
svd
Streptomyces viridosporus
Brite
KEGG Orthology (KO) [BR:
svd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
svd03032
]
CP969_27990
03400 DNA repair and recombination proteins [BR:
svd03400
]
CP969_27990
Enzymes [BR:
svd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CP969_27990
DNA replication proteins [BR:
svd03032
]
Prokaryotic type
DNA Topoisomerases
CP969_27990
DNA repair and recombination proteins [BR:
svd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CP969_27990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
QEU88102
LinkDB
All DBs
Position
6054230..6056353
Genome browser
AA seq
707 aa
AA seq
DB search
MTADTSVPSTALLAGADRDGSNYTARHLLVLEGLEAVRKRPGMYIGSTDSRGLMHCLWEI
IDNSVDEALGGYCDRIEVVLHDDGSVEVRDNGRGIPVDVEPKTGLSGVEVVMTKLHAGGK
FGGGSYAASGGLHGVGASVVNALSARLDVEVDRGGHTHAISFRRGVPGAFAAGGPDGKFE
AGNGLRKVKKIPKSRSGTRVRYWADRQIFLKDAKLSLETLHQRARQTAFLVPGLTIVVRD
EYGLGEGGSKGEESFRFDGGISEFCEFLATDRPVCDTLRFTGQGTFKETVPVLDEHGQMT
PTEVTRELGVDVALRWGTGYDATVRSFVNIIATPKGGTHVAGFEQAVAKTMNEVLRAKKM
LRVAEDDIVKDDALEGLTAVVTVRLAEPQFEGQTKEVLGTSAARRIVNTVVSRELKAFLT
STKRDAAQQARVVLEKAVAAARTRIAARQHKDAQRRKTALESSTLPAKLADCRSDNVDRS
ELFIVEGDSALGTAKLARNSEFQALLPIRGKILNVQKSSVTDMLKNAECGAIIQVIGAGS
GRTFDIDAARYGKIIMMTDADVDGSHIRTLLLTLFHRYMRPMVEAGRVFAAVPPLHRIEL
VQPKRGQEKYVYTYSDRELRDKLMEFQSKGVRYKDSIQRYKGLGEMDADQLAETTMDPRH
RTLRRINLTDLEAAEQVFDLLMGNDVAPRKEFISSSAATLDRSRIDA
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgccgatacgtccgtgccgtccacagctctgctggcaggagcagaccgggacggt
tccaactacaccgcgcggcacctgctcgtcctcgaggggctcgaggccgtgcggaagcgc
cccggcatgtacatcggatcgaccgacagccggggtctgatgcactgcctctgggagatc
atcgacaactccgtggacgaggccctcgggggctactgcgaccgcatcgaggtggtcctc
cacgacgacggctcggtggaggtccgggacaacggccgcggcatcccggtcgacgtcgaa
cccaagaccggcctctccggcgtcgaggtcgtcatgaccaagctgcacgcgggcggcaag
ttcggcggcggctcgtacgccgcctccggcggtctgcacggcgtcggcgcctccgtcgtc
aacgccctgtccgcgcggctggacgtcgaggtggaccgcggcgggcacacccacgcgatc
agcttccggcgcggtgtccccggagccttcgccgccgggggcccggacgggaagttcgag
gccgggaacggactgcgcaaggtcaagaagatcccgaagagccgcagcggcacgcgtgtg
cgctactgggccgaccgccagatcttcctcaaggacgccaagctctccctggagacgctg
caccagcgcgcccgccagaccgcgttcctggtgcccggcctgaccatcgtcgtccgcgac
gagtacgggctcggcgaggggggcagcaagggcgaggagtcgttccgcttcgacggtggc
atcagtgagttctgcgagttcctggccaccgacaggcccgtctgcgacaccctccggttc
accgggcagggcaccttcaaggagaccgtccccgtcctcgacgagcacggccagatgacg
cccaccgaggtcacccgcgagctcggtgtcgacgtcgcgctgcgctgggggaccggctac
gacgcgacggtcaggtcgttcgtcaacatcatcgccacccccaagggcggcacccacgtc
gccggcttcgagcaggccgtcgccaagacgatgaacgaggtgctgcgcgcgaagaagatg
ctgcgcgtggccgaggacgacatcgtcaaggacgacgccctggagggcctcacggcggtg
gtcacggtccgcctggccgagccgcagttcgagggccagaccaaggaggtcctcggcacc
tcggcggcccgccgcatcgtgaacaccgtcgtctcccgcgaactcaaggccttcctgacc
tccaccaagcgggacgccgcccagcaggcgagggtcgtcctggagaaggccgtcgccgcg
gcccggacccgcatcgcggcccgtcagcacaaggacgcccagcgccgcaagacggctctg
gagtcctccacgctgcccgccaagctggccgactgccgcagcgacaacgtcgaccgcagc
gagctgttcatcgtcgagggcgactccgcgctcggtacggcgaagctcgcccggaactcg
gagttccaggcgctgctgccgatccgcgggaagatcctcaacgttcagaagtcgtccgtg
acggacatgctgaagaacgccgagtgcggtgcgatcatccaggtcataggagcggggtcg
gggcggaccttcgacatcgacgcggcccgctacggcaagatcatcatgatgaccgacgcc
gatgtggacggctcccacatccgcaccctgctcctgacgctgttccaccgctacatgcgg
cccatggtcgaggcgggccgggtgttcgccgcggtgccgccgctgcaccgcatcgagctg
gtccagcccaagagggggcaggagaagtacgtctacacgtactcggaccgggagctgcgc
gacaagctcatggagttccagagcaagggcgtccggtacaaggactcgatccagcgctac
aagggcctcggcgagatggacgccgaccagctggccgagacgaccatggacccgcgccac
cgcaccctgcgccggatcaacctcaccgacctggaggccgccgagcaggtcttcgacctg
ctcatgggcaacgacgtcgccccccgcaaggagttcatctccagctccgcggcgaccctg
gaccggtcccgcatcgacgcctag
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