Streptomyces viridosporus: CP969_31735
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Entry
CP969_31735 CDS
T07568
Name
(GenBank) type IV secretion protein Rhs
Organism
svd
Streptomyces viridosporus
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
T7SS_signal
DUF6531
TEN_YD-shell
Tox-HNH-EHHH
RHS
OCRE
Motif
Other DBs
NCBI-ProteinID:
QEU88749
LinkDB
All DBs
Position
complement(6928727..6933505)
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AA seq
1592 aa
AA seq
DB search
MGIGDFIKDITPDSVEDAVEDGVEWLGDRVEGAGNWTADRLDDVGWESGADWVREQSRSV
ANRMGAEVDEMDLGQTEDRTKLVHGSPEKIRSTAGRLRAFQEAFDDAGEGLKGLDSSQLK
GEAAEALRKAVSTQPPKWFTGADACGKAAAALESFASTVSWAQGQAQTAIDKWKEGVKAS
EDAADAHRKKVDAYNKAVDRYNAQPADRRDPSTLPPCPAPTFDDPGEKLMREAQEILAEA
RKQRNTAAETARSAVRAARDLAPEKPSYAQQVGDGLQELQIMGDHVGGGIIKGTAGLLNF
VRGINPLDPYNLTHPAEYATNLNSLASGLLLAANDPVGTGKQMVSDFMKDPYEGFGRLLP
DLALTAATGGGGAAVKGVRIAADAADAARVRNLVDNAPDGTHNRPDGHRTTDGTDPVDLA
SGRMFLPQTDVEIPGILPLVFTRRTESGCTAGRFLGPSWTSTVDERLVIDPVGVVHVTAD
GLLITYSHPAPGAPTRPESGTARAPLARDGNGDYTVTDPDTGLVRHFAAPPGGEPGGDGT
AWLMSVTERNGHTVTVDRTDDGLPTALTHSAGHRVRLTTTEGRITALSLAGAGEDGADLP
LMAYGYQDGDLTTVTKPSGATTTFLYDDRRRVTAWIDSNGSRYDYAYDDRDRVVAEGGEA
GHVQITLTYTEPDPETGHRTTTLTTADGRTTRHRIDHRCRVIATTDPLGHTTRYSYDTHG
NLLTRTDPLGRTTGFTHDGNDRLVSVVRPDGSRLDMKPGPFGRYTELRGPDGGRWLQDFD
ERGNRVAVTDPAGHTTRYAYDARGRLTSITDALGAVTTVHCDAMGLPLQVVDPAGGTTVF
RRDSLGNAIRVTDPTGGVTCLEWNRDGHLVRRAAPNGATESWTYDGEGNRLTHTDPIGGV
SRFEYTHFDLLTARTHPDGARYAFEYDADLRLVRVTDPRGARWSYEYDAAGRMVSETDFD
GRTLTYRFDSAGQLTSRTDSLGRTISFERDQLGQVIRKDADGQVTTYGYDRAGRLLRASG
PDSELLYAYDRLGRVKSELVDGRATSYAYDAAGRRTRRITPTGHVTTYAYDAGGRPERLT
TGGRPVVFTHDVAGRETARVFGESADALTITTAWDEAGRLSAEHLTAGGRTLNSRTYSYR
ADGHLGSVDDLLSGPRTFDLDAVGRVTAVHAQGWTERYAYDASGNQTEASWPASHPGNEA
TGPRTYTGTAITRAGAVRFEHDALGRITLRQKTRLSRKPDTWRYSWDAENRLTSVITPDG
TRWRYRYDPLGRRIAKERLADDGEGVTEEIRFTWDGMTLCEQTLHQRDLPNPVALTWDHR
SGVPLSQTERILTADARQDEVDRRFFAIATDLVGTPTELIGQDGDIAWRTRATLWGTTSW
TSSSTAYTPLRFPGQYYDPETGLHYNLFRHYDPETARYLTPDPLGLTPAPNPVAYVHNPH
TSSDPLGLSPYPRGEKGNPFENRADAEKAAFELAGVRYGEEPIAEWVVTGDKSLKHAPGY
IYSPERTHWGNFRQFETDSGSRVIVEHTHDPAGPHFHAGKPKIDDTRNFVNFGWDNARVQ
RPDGSLGYPESMERYGKMNKPGGDHHLFYEGN
NT seq
4779 nt
NT seq
+upstream
nt +downstream
nt
gtgggcatcggcgacttcatcaaggacatcacgccggactcggtggaggacgcggtcgag
gacggtgtcgagtggctcggcgaccgggtcgagggcgcggggaactggaccgcggaccgg
ctggacgacgtcggctgggagtccggcgcggactgggtgcgcgagcagtcgcgttcggtc
gcgaaccggatgggcgccgaggtcgacgagatggacctggggcagaccgaggacaggacc
aagctggtccacggcagcccggagaagatccgttccaccgccgggagactccgcgccttc
caggaggcgttcgacgacgccggcgagggcctgaagggcctggactcctctcagctcaag
ggtgaggccgccgaggcgttgcggaaggcggtgagcacccagccgccgaagtggttcacc
ggcgccgacgcctgcgggaaggcggccgccgcgctggagtcgttcgcctccaccgtgagc
tgggcgcaggggcaggcgcagacggcgatcgacaagtggaaggagggcgtgaaggcgtcc
gaggacgccgccgacgcccaccgcaagaaggtcgacgcctacaacaaggccgtcgaccgc
tacaacgcccagcccgccgaccggcgtgacccgtccacgctcccgccctgtccggcgccg
acgttcgacgacccgggcgagaagctgatgcgggaggcgcaggagatcctcgccgaggcc
cgcaagcagcggaacaccgccgcggagaccgcccgcagcgcggtccgcgcggcgcgggac
ctggctccggagaagccgtcgtacgcgcagcaggtgggcgacggtctgcaggagctgcag
atcatgggcgaccacgtcggcggcggcatcatcaagggcacggcggggctgctcaacttc
gtgcgggggatcaacccgctggacccgtacaacctcacccacccggccgagtacgccacg
aacctcaacagcctggcctccggcctgctgctggccgccaacgatccggtcggcacgggc
aagcagatggtcagtgacttcatgaaggacccctacgaggggttcggccggctcctcccc
gacctggcgctgaccgcggccaccggcggaggcggcgccgcggtcaagggcgtgcgcatc
gccgcggacgccgccgacgccgcacgcgtccgcaacctggtcgacaacgcccccgacggc
acccacaaccgccccgacggccaccgcaccaccgacggcaccgaccccgtcgacctcgcc
tccggccgcatgttcctgccccagacggacgtggagatccccggcatcctgccgctggtc
ttcacccgccgcaccgagtccggctgcacggcgggccgcttcctggggccgtcctggacc
tccaccgtcgacgagcgcctggtgatcgacccggtcggcgtcgtccacgtcaccgccgac
ggcctgctgatcacctattcgcaccccgcccccggcgcccccacccgtcccgagtccggc
accgcccgcgccccgctggcccgtgacgggaacggcgactacacggtcaccgaccccgac
accggtctggtccgccacttcgccgccccgcccggcggcgaacccggcggcgacggaacc
gcctggctgatgtccgtcaccgagcgcaacggccataccgtcaccgtcgaccgcaccgac
gacggcctgccgacggccctgacccactcggccggccaccgggtgaggctgaccaccacc
gagggccggatcaccgccctctccctggccggcgcgggcgaggacggcgccgacctgccg
ctgatggcttacggctaccaggacggcgacctcaccaccgtcaccaagccctccggcgcc
accaccaccttcctctacgacgaccgccgccgcgtcaccgcctggatcgactccaacggc
agccgctacgactacgcctacgacgaccgcgaccgcgtcgtcgcggagggcggcgaggcc
ggccacgtccagatcaccctcacctacaccgaacccgaccccgagaccggccaccgcacc
accaccctcaccaccgccgacgggcgcaccacccgccaccggatcgaccaccgctgccgg
gtgatcgccaccaccgacccgctcggccacaccacccgctacagctacgacacccacggc
aacctgctcacccgcaccgacccgctgggccgcaccaccggcttcacccacgacgggaac
gaccggctggtctccgtggtccgtccggacggcagccgactcgacatgaagcccggaccg
ttcgggaggtacacggaactccgcgggccggacggcggccgctggctccaggacttcgac
gagcgcggcaatcgagtcgcggtgaccgacccggccggccacaccacccggtacgcctac
gacgcccggggacgcctgacgtcgatcaccgatgcgctcggggccgtcaccacggtccac
tgcgacgccatgggcctgcccctgcaggtcgtcgacccggccggcgggaccaccgttttc
cggcgcgactccctcggaaacgcgatacgcgtcaccgaccccacgggtggcgtcacttgt
ctcgagtggaacagggacggccatctggttcgccgggcggctccgaacggcgccaccgag
tcgtggacctacgacggcgagggcaaccggctcacccacaccgacccgatcggcggggtt
tcccgtttcgagtacacccacttcgacctgctcacagctcgcacccatccggacggagcc
cggtacgcattcgagtacgacgccgatctgcggctcgtccgggtcaccgacccgcggggc
gcacgctggagctacgagtacgacgcggccggtcgcatggtgtcggagaccgacttcgac
ggtcgaaccctcacctaccgtttcgactccgccggacaactcacctcccggaccgactcg
ctcggcaggaccatctccttcgagcgggaccaactcggccaggtgatccggaaggacgcc
gacgggcaggtgaccacctacggctacgaccgggccgggcgccttctacgggcgtcgggc
ccggacagcgaactcctctatgcgtacgaccgcctaggacgggtcaagtccgaactcgtc
gacggccgggccacgagttacgcgtacgatgccgcgggccgtcgcactcgccgcatcacc
cccaccggccatgtgaccacctatgcgtacgacgccggtggccgtcccgagcgcctgacc
accggggggcgtccggtcgtcttcacccacgatgtcgcgggccgtgaaacggcccgtgtc
ttcggggagtccgccgacgccctcaccatcaccacggcctgggacgaggccgggcgactg
tccgccgagcacctgaccgccggcggccgtacgctcaacagccgaacctactcctaccgt
gcggacggtcacctcggctctgtcgacgacctgttgtcgggcccccgcaccttcgacctg
gacgcagtcggccgagtcaccgccgtccacgcgcagggctggaccgagcggtacgcctac
gacgcgagcggcaaccagaccgaggcgtcctggcccgcttcccaccccggcaacgaagcc
accggcccgcggacctacaccggcacagcgatcacccgtgccggagccgtccgcttcgag
cacgacgccctcggccgcatcaccctgcggcagaagacccgcctgtcccgcaagcccgac
acctggcgctactcgtgggacgccgagaaccgcctcacctcggtgatcactccggacgga
acccgctggcgctaccgctacgaccccttgggccgccgcatcgccaaggagcgcctggcc
gacgacggcgaaggcgtgacggaggagatccggttcacctgggacggcatgaccctctgc
gaacagacccttcaccagagggacctcccgaacccagtcgccctcacctgggaccaccgg
tccggtgttcccctctcacagaccgagcgcatcctcacagcggacgctcgtcaggacgag
gtggaccggcgtttcttcgccatcgccaccgacctcgtcgggacccccaccgagttgatc
ggtcaggacggcgacatcgcctggcgcacccgcgccacgctctggggcaccacctcctgg
accagctccagcacggcctacaccccgctccgcttccccggccagtactacgacccggaa
accggcctccactacaacctgttccgccactacgaccctgagaccgcccgctatctcacc
cccgatcccctcgggctcactcccgcacccaatcccgtcgcctacgtccacaaccctcac
acctcgtccgaccctctcggactcagcccttatccgcgcggcgaaaaaggcaacccgttc
gaaaaccgtgcggatgcggaaaaagccgcattcgagctcgccggcgtccgttacggcgaa
gagcccatcgccgagtgggtcgtcaccggggacaagagcctgaagcacgcgccgggttac
atctattcgcccgaacgaacacactgggggaattttcggcagttcgagacggacagcggc
tcacgcgtgattgtcgagcacacccatgatccggcaggcccgcacttccatgccggaaag
ccgaagatcgatgacacccggaacttcgtcaacttcggctgggacaacgccagggtgcag
cgaccggacggcagtctgggctatccggagtccatggagagatatggcaagatgaacaaa
ccgggcggtgaccaccacctcttctacgaaggcaactga
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