Streptomyces venezuelae: SVEN_0475
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Entry
SVEN_0475 CDS
T02274
Name
(GenBank) RNA polymerase sigma factor SigB
KO
K03090
RNA polymerase sigma-B factor
Organism
sve
Streptomyces venezuelae
Brite
KEGG Orthology (KO) [BR:
sve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sve03021
]
SVEN_0475
Transcription machinery [BR:
sve03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SVEN_0475
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
MarR_2
DUF7343
HTH_Crp_2
HTH_24
HTH_23
Sigma70_ECF
GerE
MarR
HTH_3
HTH_37
HTH_AsnC-type
Motif
Other DBs
NCBI-ProteinID:
CCA53762
UniProt:
F2R770
LinkDB
All DBs
Position
514640..515617
Genome browser
AA seq
325 aa
AA seq
DB search
MSNHRTTARIGRTSALPPRAGPEPPAEALTGLPEIADPLAVSTSDARTLSTALFERLRSL
EEGTASYSYVRNTLVELNLSLVKYAATRFRHSSENWEDLVQVGTVGLIKAINRFDPARGN
EFMSFALPTVLGEIRRHLRDTSWSVHVPRRLQELRLDVAKANDALEQELGRPPTAAELSD
RLHITEDELREGRIAANGFASRSLDVPVDDEDAGPGMLARCLGSDDDAFEKVLNLEALKP
LVAALSERDRTILALRFGGELTQAEIGERLGLSQMHVSRLLSRILGGLRTALTTEDPPAA
EAATGSPASGTRGTAAARRVAAKRT
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaccaccgcaccaccgccaggatcggccgaacctcggccctccccccgcgcgcc
ggccccgagccgccggcggaggccctgaccggtctcccggagatcgcggaccccctggcc
gtgagcacctcggacgcgcggacgctctcgacggcgctcttcgagcggctgcgctcactg
gaggagggcacggcgtcgtactcgtacgtgcgcaacaccctggtcgagctgaacctgagc
ctcgtcaagtacgcggccacccggttccgtcactccagcgagaactgggaggacctcgtc
caggtgggcacggtcggcctcatcaaggccatcaaccgcttcgaccccgcacgcgggaac
gagttcatgtccttcgccctgcccacggtgctcggcgagatccggcgccacctgcgggac
accagctggagcgtccacgtgccccggcggctgcaggagctgcgcctcgacgtggccaag
gcgaacgacgccctggagcaggagctgggcaggccgccgacggcagccgagctcagcgac
cgtctccacatcacggaggacgagctgcgcgagggccggatcgccgcgaacgggttcgcc
agccgctcgctcgacgtgcccgtggacgacgaggacgccgggcccggcatgctcgcccgc
tgtctcggtagcgatgacgacgccttcgagaaggtgctcaacctggaggcgctgaagccg
ctcgtggccgccctttccgagcgggaccgcacgatcctggcgctgcgtttcgggggcgag
ctgacccaggcggagatcggcgagcgtctcggcctctcgcagatgcacgtgtcgcggctc
ctcagccgcatcctgggcggcctgcgtacggccctgaccacggaggacccgccggcggcc
gaggccgcgaccgggtcgcccgcgtcagggacccgcgggaccgccgccgcccggagggtc
gccgcgaagcggacctga
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integrated database retrieval system
