Streptomyces venezuelae: SVEN_0872
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Entry
SVEN_0872 CDS
T02274
Name
(GenBank) Exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
sve
Streptomyces venezuelae
Brite
KEGG Orthology (KO) [BR:
sve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sve03400
]
SVEN_0872
DNA repair and recombination proteins [BR:
sve03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SVEN_0872
Archaeal homologous recombinant proteins
SVEN_0872
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_27
SMC_N
AAA_29
HARP
Peptidase_M3_N
AAA
Motif
Other DBs
NCBI-ProteinID:
CCA54159
UniProt:
F2RB31
LinkDB
All DBs
Position
complement(1000111..1003149)
Genome browser
AA seq
1012 aa
AA seq
DB search
MRLHRLEITAFGPFGTTQTVDFDALSSAGLFLLHGPTGAGKTSVLDAVCFALYGSVPGVR
QTPGGSLRSDHAPVGTSTEVLLELTVGDRRLEITRRPAQQRPKKRGGGFTTEKAQTWLRE
YDPATRAWNGLSRSHQEIGEEITQLLGMSREQFCQVVLLPQGDFARFLRADAEARGKLLG
RLFDTRRFAAVEERLAELRRGAQQQVEEGDERLLALAHRMGQAARGLGAADSSVEGRPGE
PGLADAVLSWAAVARTEAREALDIARVRLDTAEARQRAARAALEAENDLAARQARHADAL
LRKERLTAHAPERDRLQAALDLSLKADRVAPALGLREDAERAYRAARTARERARALLAPE
LADAGAEQLAALGDRLREELGGLEAARRAERRAAAVAGERTALAREARADDDVLRDAANW
LAGWEPRRAALTEHVEAARDAAARAEHLAGRLDPARRRLAAARRRDALAEGARVAEARLA
DARERRNTAHENWLDVKSRRLEGIAAELAVTLGPGDPCQVCGSTDHPAPARTTVDHVDRA
TEDAAYAAYTRAEETRTTAERELAVTRESLAAARDEALDGAPAGAPEPTVAELALDVDAL
TRRHAEAHALAGQTHGAREALARAEREHEERVAAQREAERRVAARTSRREALDREQATLD
EELARGRGAFASVAEHADRLERRIALLADATGAVRAAELAAQHLKEADDRLSDAAYRAGF
TTPAEASAALLREAERRDHQQRVDAWQAEAAAVADRLAEPGTAAAAALPPADPHAAAAVH
AAAERALREADSVLAAARERATGLDGLSRQAAAEVRRLGPLREEYDRVARLAALTAGTST
ENERRMRLESYVLAARLEQVAAAATARLQRMSSGRYTLVHSDARSGGKRAGLGLHVVDAW
TGNERDTATLSGGETFFASLALALGLADVVTDEAGGVRLDTLFIDEGFGSLDEQTLDEVL
DVLDSLRERDRSVGIVSHVGDLRRRIPAQLEVVKARQGSAVRLRTGGEALGG
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
gtgaggctgcaccgcctggagatcaccgcgttcggccccttcggcaccacgcagaccgtc
gacttcgacgccctgtcctccgccgggctgttcctgctgcacgggccgaccggcgccggg
aagacctccgtcctcgacgccgtctgcttcgccctgtacgggagcgtgcccggcgtccgt
cagacccccggcggctccctgcgcagcgaccacgcccccgtcggcacctccaccgaggtg
ctgctcgaactgacggtgggggaccggcgcctggagatcacccggcgccccgcccagcag
cgccccaagaaacgcggcggcggattcaccaccgagaaggcccagacctggctgcgcgag
tacgacccggccacgcgcgcgtggaacggcctcagccgctcccaccaggagatcggcgag
gagatcacccagctgctcggcatgagccgcgaacagttctgccaggtggtcctcctcccg
cagggcgacttcgcccgcttcctgcgcgcggacgccgaagcccgcggcaagctcctcggc
cggctcttcgacacccgccgcttcgccgccgtcgaggagcgcctcgccgaactgcggcgc
ggcgcgcagcagcaggtcgaggagggcgacgagcggctcctcgccctcgcccaccggatg
ggccaggccgcccgtggcctcggggccgccgacagttccgtcgagggcaggcccggtgaa
cccgggctcgccgacgcggtcctcagctgggccgccgtcgcccgcaccgaggcccgcgag
gccctcgacatcgcccgcgtgcggctcgacacggccgaggcccgtcagcgcgccgcgcgc
gccgcgctcgaagccgagaacgacctcgccgcccgccaggcccgacacgccgacgccctg
ctccgtaaggagcggctcaccgcccacgcccccgagcgcgaccgcctccaggccgccctc
gacctcagcctcaaggccgaccgggtggcgcccgccctcggtctgcgtgaggacgccgag
cgcgcgtaccgcgcggcgcgcaccgcccgggaacgcgcccgcgcgctgctcgcccccgaa
ctcgccgacgccggggccgagcagctcgccgccctcggagaccggctccgcgaagagctg
ggcggcctggaggcggcccgcagggccgaacgccgcgccgccgccgtcgccggggaacgg
accgccctcgcccgcgaggcgcgcgccgacgacgacgtgctgcgcgacgcggccaactgg
ctggccggctgggaaccgcgccgcgccgcgctcaccgagcacgtcgaggccgcccgggac
gccgccgcgcgtgccgagcacctcgccggccgtctcgaccccgcccgccgacggctcgcc
gccgcgcgtcgccgcgacgccctcgccgagggcgcccgggtggccgaggcgcgactcgcc
gacgcccgcgagcgccggaacaccgcccacgagaactggctggacgtcaagtcccgccgc
ctcgagggcatcgccgccgaactcgccgtcaccctcggccccggcgacccctgtcaggtc
tgcggctccaccgaccacccggcccccgcccgcaccaccgtcgaccacgtcgaccgggcc
accgaggacgccgcctacgcggcctacacccgcgccgaggagacccggaccaccgccgaa
cgcgaactggccgtcacccgcgagtccctggccgcggcgcgcgacgaggccctggacggc
gccccggccggtgcacccgagccgaccgtcgccgaactggccctcgacgtcgacgcgttg
acccgccggcacgccgaagcgcacgccctggccggacagacccacggcgcccgggaggcc
ctcgcgcgtgccgaacgggaacacgaggagcgggtcgccgcgcagcgcgaggccgaacgg
cgggtcgccgcccgcacctcgcggcgcgaggccctggaccgcgaacaggccaccctcgac
gaggaactcgcccgggggcgcggcgcgttcgccagcgtggccgaacatgccgaccgcctg
gaacgccggatcgcgctcctggccgacgccaccggagccgtacgcgccgccgaactcgcc
gcccagcacctcaaggaggccgacgaccggctctccgacgccgcctaccgggccggcttc
accaccccggccgaggcctccgccgcgctcctgcgcgaggccgaacgccgggaccaccag
cagcgcgtggacgcctggcaggccgaggcggccgccgtcgcggaccggctcgccgagccc
ggcaccgcggccgccgccgccctcccgcccgccgatccccacgccgcggccgccgtccac
gccgcggccgaacgcgccctgcgcgaggcggactccgtcctggccgccgcccgcgagcgg
gccaccggactggacgggctctcccggcaggccgcggccgaggtccgccgcctcggcccg
ctgcgcgaggagtacgaccgggtggcccgcctcgccgccctcacggcgggcacctccacc
gagaacgagcgccggatgcgcctggagtcgtacgtcctcgccgcccggctcgaacaggtc
gcggccgccgcgaccgcccgcctccagcggatgtcctccggccgttacaccctcgtgcac
tccgacgcccgctccggcggcaagcgggccggcctcggcctgcacgtcgtcgacgcctgg
accggcaacgagcgcgacaccgccaccctctccggcggcgagaccttcttcgcgtcgctc
gccctcgccctcggcctcgccgacgtcgtcaccgacgaggcgggcggcgtccgcctcgac
accctcttcatcgacgagggcttcggcagcctcgacgagcagacgctcgacgaggtcctc
gacgtcctcgactcgctccgcgagcgggaccgcagcgtcggcatcgtcagccacgtcggt
gacctgcgccgccggatcccggcccagctggaggtcgtcaaggcacggcagggctcggcg
gtccggctccgcaccggcggggaggccctcggcggctga
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