Streptomyces venezuelae: SVEN_2255
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Entry
SVEN_2255 CDS
T02274
Name
(GenBank) RNA polymerase principal sigma factor HrdA
KO
K03086
RNA polymerase primary sigma factor
Organism
sve
Streptomyces venezuelae
Pathway
sve02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sve00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SVEN_2255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sve03021
]
SVEN_2255
Transcription machinery [BR:
sve03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SVEN_2255
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
LexA_DNA_bind
HTH_28
Motif
Other DBs
NCBI-ProteinID:
CCA55541
UniProt:
F2R124
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All DBs
Position
complement(2432504..2433514)
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AA seq
336 aa
AA seq
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MQTQFVSQEPPAAAPDEQPEIPPQRRRPDLGGNGPSSDLFRQYLREIGRIPLLTAEEEVD
LARRVEAGLFAEEKLANTPDLDSRLASDLDRLVVLGRIAKRKLIEANLRLVVSVAKRYVG
RGLTMLDLVQEGNLGLIRAVEKFDYARGYKFSTYATWWIRQAMSRALADQARTIRVPVHV
VELINRVIRVQRRMLQERGYEPTAEEVAAQLDLAPERVGEVLRLAQEPVSLHAPVGEEED
VALGDLIEDGDAASPVESAAFLLLRRHLEDVLSTLGERERKVVQLRYGLDDGRPRTLEEI
GRIFGVTRERIRQIESKTLGKLRDHAYADQLRGYLD
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
gtgcagacccagttcgtgtcccaggaaccgcccgccgccgcaccggacgagcagccggag
ataccaccccagcgccgccgccccgacctcggcggcaacgggccctcctccgacctcttc
cgccagtacctccgcgagatcggccgcatcccgctgctgaccgccgaggaggaggtcgac
ctggcccgccgggtcgaggccggactcttcgcggaggagaaactcgccaacacccccgac
ctggactcccggttggcgagcgacctggaccggctcgtcgtcctggggcggatcgccaag
cgcaagctgatcgaggccaacctccgcctcgtcgtctccgtcgccaaacggtacgtgggg
cgcggcctgaccatgctggacctcgtccaggagggcaacctcggcctcatcagggccgtc
gagaagttcgactacgcgcgcggctacaagttctccacgtacgccacctggtggatccgc
caggcgatgtcccgggccctcgccgaccaggcccggaccatccgcgtccccgtgcacgtc
gtcgaactcatcaaccgggtcatccgggtccagcgccggatgctccaggaacgcggctac
gaacccaccgccgaggaggtcgccgcccagctggacctggcccccgagcgggtcggcgag
gtgctccggctcgcccaggaaccggtctccctgcacgcccccgtcggcgaggaggaggac
gtcgccctcggcgacctcatcgaggacggcgacgccgcctcacccgtggagtccgccgcc
ttcctgctgctccgccgccacctggaggacgtcctgtccaccctcggcgagcgcgaacgc
aaggtcgtccagctccgctacggcctcgacgacggccggccccgcaccctggaggagatc
ggccgcatcttcggcgtgacgcgcgaacgcatccgccagatcgagtccaagaccctcggc
aaactccgggaccacgcctacgccgaccagctgcgcggctatctcgactag
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