Streptomyces venezuelae: SVEN_2536
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Entry
SVEN_2536 CDS
T02274
Name
(GenBank) RecD DNA helicase YrrC
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
sve
Streptomyces venezuelae
Pathway
sve03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sve00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SVEN_2536
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sve03400
]
SVEN_2536
Enzymes [BR:
sve01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
SVEN_2536
DNA repair and recombination proteins [BR:
sve03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SVEN_2536
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
Viral_helicase1
AAA_11
HHH_5
AAA_22
Helicase_RecD
TraI_hel_assoc_N
PIF1
PhoH
NPHP3_N
AAA_16
nSTAND3
HTH_IclR
UvrD-helicase
DEAD
TrwB_AAD_bind
ABC_tran
AAA
DUF87
ATPase_2
SLFN-g3_helicase
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
CCA55822
UniProt:
F2R3I0
LinkDB
All DBs
Position
complement(2755481..2757823)
Genome browser
AA seq
780 aa
AA seq
DB search
MGHVAGSPIFPTSYRAGEPPPRHGPAPAVRPVRYRRVMSNEGRGPGSAVLEGVLERITYA
NEESGYTVARVDTGRGAGDLLTVVGSLLGAQPGESLRMEGRWGSHPQYGKQFTVDNYTTL
LPATIQGIRRYLGSGLVKGIGPVFADRITQHFGLDTLRILEDAPARLIEVPGLGPKRTKN
IIAAWEEQKAIKEVMVFLQGVGVSTSIAVRIYKKYGDASISVVRNQPYRLAADVWGIGFL
TADKIAQAVGIPHDSPDRVKAGLQYALSQSSDQGHCYLPEERLIADAVKLLQVDTGLVIE
CLAELAEDPEGVVRETVPGPEGTPVTAVYLIPFHRAELSLAGQLRRLLRAEEDRMPAFRD
VPWDRALGWLADRTGASLAPEQEEAVRLALTRKVAVLTGGPGCGKSFTVRSIVELARAKK
AKVVLAAPTGRAAKRLAELTGAEASTVHRLLELKPGGDAAYDRDRPLDADLVVVDEASML
DLLLANKLVKAVAPGAHLLLVGDVDQLPSVGAGEVLGDLLAPGSPVPAVRLTRIFRQAQE
SGVVTNAHRINAGIPPRTEGLPDFFLFSEEETEDAARVAVEVAARRIPARFGLDPRRDVQ
VLAPMHRGPAGAGALNGLLQQAVTPARPDLPEKRFGGRVFRVGDKVTQIRNNYEKGANGV
FNGTVGVVTALDTVEQRLTVRTDEDEEVAYDFDELDELAHAYAVTIHRSQGSEYPAVVIP
VTMSAWMMLQRNLLYTAVTRARKLVVLVGSRRAIAQAVRTVSAGRRFTALAFRLTGGTLV
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
gtgggtcatgtggcaggttcgcccatatttcccacatcgtaccgcgcgggcgagcccccg
ccccgccacgggccggcccccgctgtccgaccggttcgctaccgtcgggtcatgtccaac
gaaggtcgcgggccggggtccgcagtgctcgaaggggtgctggagcggatcacctacgcc
aacgaggagagcgggtacacggtcgcccgggtcgacaccggccggggggccggggatctg
ctcaccgtggtcggctcgctgctcggcgcgcagccgggggagtcgctgcggatggagggc
cgttgggggtcgcatccgcagtacgggaagcagttcaccgtcgacaactacacgacgctc
cttcccgccaccatccaaggcatccgccgctatctcgggtccgggctcgtcaagggcatc
gggcccgtcttcgccgaccgcatcacccagcacttcgggctcgacaccctgcggatcctg
gaggacgcccccgcccggctgatcgaggtcccgggcctgggcccgaagcgcacgaagaac
atcatcgcggcctgggaggagcagaaggccatcaaggaggtgatggtcttcctccagggg
gtcggggtgtccacgtccatcgccgtgcggatctacaagaagtacggggacgcctcgatc
tccgtcgtccgcaaccagccctaccggctcgccgccgacgtctggggcatcggcttcctc
accgccgacaagatcgcccaggccgtgggcatcccgcacgacagccccgaccgggtgaag
gcgggcctgcagtacgccctgtcgcagtccagcgaccaggggcactgctacctcccggag
gagcggctgatcgccgacgcggtgaagctgctccaggtcgacacagggctcgtcatcgag
tgcctcgccgagctggccgaggaccccgagggcgtggtgcgggagaccgtccccgggccg
gaggggacgcccgtcaccgccgtgtacctgatccccttccaccgggccgagctgtcgctc
gccggacagctgcggcgcctcctgcgggccgaggaggaccggatgcccgccttccgggac
gtgccctgggacagggccctcggctggctcgccgaccgcaccggcgcctccctcgccccc
gagcaggaggaggccgtacggctcgccctcacccggaaggtcgccgtgctcaccggcggc
cccggctgcggcaagtccttcacggtccgttccatcgtggagctggcccgcgccaagaag
gccaaggtcgtcctcgccgcgcccaccggccgcgccgccaagcggctcgccgagctgacc
ggcgccgaggcctccaccgtgcaccggctgctcgaactcaagccgggcggggacgccgcg
tacgaccgggaccggcccctggacgccgatctcgtcgtcgtcgacgaggcctccatgctc
gacctgctgctggcgaacaagctggtgaaggcggtggcgccgggagcccatctgctgctg
gtgggggacgtggaccagctcccgtcggtcggggcgggcgaggtcctcggcgacctgctc
gccccgggcagtccggtgcccgccgtccggctgacccggatcttccggcaggcgcaggag
tccggcgtggtcaccaacgcgcaccggatcaacgccggcatcccgccgcggaccgagggc
ctgccggacttcttcctcttctccgaggaggagaccgaggacgccgcccgggtcgccgtg
gaggtcgcggcccgccggattccggccaggttcggcctcgacccgcgccgtgacgtccag
gtcctcgcccccatgcaccggggcccggccggcgccggcgcgctgaacgggctgctccag
caggccgtcaccccggcccgccccgaccttccggagaagcggttcggcggccgggtcttc
cgggtgggtgacaaggtcacccagattcggaacaactatgagaagggggccaacggggtc
ttcaacggtacggtcggcgtcgtcacggcactggacaccgtcgagcagcggctgaccgtg
cggacggacgaggacgaggaggtggcgtacgacttcgacgaactggacgagctcgcccac
gcgtacgcggtcaccatccaccgttcgcagggcagcgagtatcccgccgtggtgatcccg
gtcaccatgagcgcgtggatgatgctccagcggaacctgctctacacggccgtgacccgg
gcccggaagctcgtcgtcctcgtcgggtcccgccgggcgatcgcccaggcggtccgtacg
gtctccgcgggcaggcgctttaccgcactcgccttccggctcacaggcggcaccctcgtg
tga
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