Streptomyces venezuelae: SVEN_2808
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Entry
SVEN_2808 CDS
T02274
Name
(GenBank) RNA polymerase sigma factor SigB
KO
K03090
RNA polymerase sigma-B factor
Organism
sve
Streptomyces venezuelae
Brite
KEGG Orthology (KO) [BR:
sve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sve03021
]
SVEN_2808
Transcription machinery [BR:
sve03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SVEN_2808
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_Crp_2
HTH_23
GerE
Sigma70_ECF
MarR_2
HTH_3
IF2_N
MarR
HTH_37
KORA
Motif
Other DBs
NCBI-ProteinID:
CCA56094
UniProt:
F2R643
LinkDB
All DBs
Position
3080189..3081079
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AA seq
296 aa
AA seq
DB search
MSPRLDAPRTPDAPSAAVPQDHPLDFAHDLPRDRPLDTIGPVDARALSKQLFARLAELEE
GTHDHAYVRNTLVELNLALVRFAAARFGTRSEPMEDIVQVGTIGLIKAIDRFELTRGVEF
PTFAMPTIIGEIKRFFRDTSWSVHVPRRLQELRLDLARAGDTLAQRLDRAPTVAELAEEL
GIAPEEVVEGMAASNAYTASSLDAQPDEEEGGGGEATLADRLGYEDHGLTGIEYIASLKP
MIASLPARERQILSLRFVSGLTQSEIGTELGISQMHVSRLLARTLARLRRGLTLEE
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgtcaccccggctcgacgccccgcgtacccccgacgcgccgtcggcagcagtcccccag
gaccacccgctcgacttcgcccacgaccttccccgcgaccgcccgctcgacaccatcgga
cccgtcgacgcacgggccctgtcgaagcagctcttcgcccggctcgccgagctcgaagag
ggcacccacgaccacgcgtacgtccgcaacaccctcgtcgaactgaacctcgccctggtc
aggttcgccgccgcccgcttcggcacgcgcagcgagccgatggaggacatcgtccaggtc
ggcacgatcggcctcatcaaggcgatcgaccgcttcgaactcacccgcggagtggagttc
cccaccttcgcgatgccgacgatcatcggcgagatcaagcgcttcttccgtgacacctcg
tggtccgtgcacgtgccccgccggctccaggagctgcggctcgacctcgcgcgggccggt
gacacgctcgcccagcgcctcgaccgcgccccgaccgtcgccgagctcgccgaggaactc
ggcatcgcccccgaggaggtcgtcgagggcatggccgcgagcaacgcgtacaccgcgagc
tcgctcgacgcccagcccgacgaggaggagggcggaggcggcgaggccacgctcgccgac
cggctcggctacgaggaccacggcctcaccgggatcgagtacatcgcctccctgaagccg
atgatcgcctcgctgcccgcccgggaacggcagatcctctccctgcgcttcgtctccggc
ctgacccagtcggagatcggcacggagctcggcatctcccagatgcacgtgtcgcggctg
ctcgcgcgcaccctcgcccggctgcgccgggggctcactctggaggaatga
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