Streptomyces venezuelae: SVEN_3171
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Entry
SVEN_3171 CDS
T02274
Name
(GenBank) hypothetical protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
sve
Streptomyces venezuelae
Brite
KEGG Orthology (KO) [BR:
sve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sve03016
]
SVEN_3171
Enzymes [BR:
sve01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
SVEN_3171
Transfer RNA biogenesis [BR:
sve03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
SVEN_3171
Prokaryotic type
tRNA splicing ligases
SVEN_3171
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
CCA56457
UniProt:
F2R8Z7
LinkDB
All DBs
Position
complement(3464676..3465869)
Genome browser
AA seq
397 aa
AA seq
DB search
MSYVEVPGAKVPIRMWTDPSTVEGGAMQQLQNVATLPWIKGLAVMPDVHYGKGATVGSVI
AMRGAVCPAAVGVDIGCGMSAVKSSLTANDLPGDLSRLRSKIEQAIPVGRGLHRTEVDPA
RLYQFPTSGWGDFWSRFDGVADAVKFRRERAAQQMGTLGGGNHFIEFCLDESGSVWLMLH
SGSRNIGKELAEHHIGEAQKLPHNQGLVDRDLAVFVADTPQMAAYRNDLFWAQEYAKYNR
AIMMALFQEVVRREFRKARVTFDQVISCHHNYVAEERYEGMDLLVTRKGAIRAGSGEFGI
IPGSMGTGSYIVKGLGNEASFNSASHGAGRKMSRSAAKRRFSTRDLEEQTRGVECRKDSG
VVDEIPGAYKPIEKVIDQQRDLVEVVAKLKQVICVKG
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtacgtagaggtacctggggcgaaagttcccatcaggatgtggaccgacccctcc
acggtggagggcggtgccatgcagcagctgcagaacgtggcgacgctgccgtggatcaag
ggcctcgccgtgatgccggacgtgcactacggcaagggtgcgacggtcggttcggtgatc
gcgatgcgcggggcggtctgtccggcggcggtcggtgtggacatcggctgcgggatgtcg
gcggtcaagtcctcgctgacggcgaacgacctgccgggcgatctgtcccggctccggtcg
aagatcgagcaggcgatcccggtgggccgcggcctgcaccgtacggaggtggacccggcc
cggctctaccagttccccacctcgggctggggcgacttctggtcgcgcttcgacggggtc
gcggacgcggtcaagttccgtcgggagcgggcggcccagcagatgggcacgctcgggggc
ggcaaccacttcatcgagttctgcctcgacgagtcgggctcggtctggctgatgctgcac
tccggttcccggaacatcggcaaggagctcgccgagcaccacatcggcgaggcgcagaag
ctgccgcacaaccaggggctcgtcgaccgtgacctggcggtgttcgtcgcggacaccccg
cagatggcggcctaccggaacgacctgttctgggcgcaggagtacgcgaagtacaaccgc
gcgatcatgatggcgctcttccaggaggtcgtccgccgggagttccgcaaggcccgggtg
accttcgaccaggtgatctcctgccaccacaactacgtggcggaggagcggtacgagggc
atggacctgctggtcacccggaagggggcgatccgggccggctccggggagttcgggatc
atcccgggctcgatgggcaccggctcgtacatcgtgaagggcctggggaacgaggcctcc
ttcaactcggcctcgcacggcgcgggccggaagatgagccggagcgcggcgaagcggcgc
ttctcgacgcgcgacctggaggagcagacgcggggcgtggagtgccgcaaggactccggt
gtcgtggacgagatcccgggggcctacaagccgatcgagaaggtcatcgaccagcagcgg
gacctggtggaggtcgtcgccaagctgaagcaggtcatctgcgtgaagggctga
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