Streptomyces venezuelae: SVEN_3786
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Entry
SVEN_3786 CDS
T02274
Name
(GenBank) RNA polymerase sigma factor SigB
KO
K03090
RNA polymerase sigma-B factor
Organism
sve
Streptomyces venezuelae
Brite
KEGG Orthology (KO) [BR:
sve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sve03021
]
SVEN_3786
Transcription machinery [BR:
sve03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SVEN_3786
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_Crp_2
MarR_2
GerE
NirdL-like_HTH
MarR
HTH_3
DUF134
HTH_24
DUF7343
HTH_31
HTH_11
Motif
Other DBs
NCBI-ProteinID:
CCA57072
UniProt:
F2REE9
LinkDB
All DBs
Position
complement(4111965..4112810)
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AA seq
281 aa
AA seq
DB search
MPASTAPQVPPQHEAGGPEAPRPRPQSTRGADTRALTQVLFGQLKNLEPGTPEHHRVRGA
LIEANLPLVRYAADRFRSRNEPMEDVVQVGTIGLINAIDRFDPDRGVQFPTFAMPTVVGE
IKRYFRDNVRTVHVPRRLHELWVQVNGATEDLTTAHGRSPTTAEIAERLRIGEDEVLACI
EAGRSYHATSLEAAQEGDGLPGLLDRLGYEDPALAGVEHRDLVRHLLVQLPEREQRILML
RYYSNLTQSQISQELGVSQMHVSRLLARSFARLRSANRIEA
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
gtgccggccagtacagcacctcaggtcccgccccagcacgaggcgggcggcccggaggcc
ccgcgcccccgcccccagagcacccgcggcgccgacacccgcgccctcacccaggtgctc
ttcgggcagctcaagaacctggagccgggcactccggagcaccaccgggtgcgcggggcc
ctcatcgaggccaaccttcccctcgtgcggtacgcggcggaccgcttccgctcccgcaac
gagccgatggaggacgtcgtccaggtcggcacgatcgggctgatcaacgcgatcgaccgc
ttcgaccccgaccggggcgtccagttcccgaccttcgccatgccgacggtcgtcggcgag
atcaagcggtacttccgcgacaacgtccgcaccgtgcacgtgccccgccggctccacgag
ctctgggtccaggtgaacggcgccacggaggacctgacgaccgctcacggccgctccccc
acgaccgcggagatcgccgagcggctgcggatcggcgaggacgaggtgctcgcctgcatc
gaggcgggacgctcgtaccacgccacctccctggaggccgcgcaggagggcgacgggctg
cccgggctgctcgaccggctcggttacgaggaccccgccctggccggggtggagcaccgc
gacctcgtccggcacctgctcgtccaactgccggagcgggagcagcggattctgatgctg
cgttactacagcaatctgacccagtctcagatcagccaggaactcggcgtctcgcagatg
catgtgtcaaggctcctcgcccggagcttcgcacgtttgagatccgcaaacagaatcgag
gcgtaa
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