Streptomyces venezuelae: SVEN_4128
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Entry
SVEN_4128 CDS
T02274
Name
(GenBank) putative ATP-dependent DNA helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
sve
Streptomyces venezuelae
Pathway
sve03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sve00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
SVEN_4128
09124 Replication and repair
03420 Nucleotide excision repair
SVEN_4128
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sve03021
]
SVEN_4128
03400 DNA repair and recombination proteins [BR:
sve03400
]
SVEN_4128
Enzymes [BR:
sve01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SVEN_4128
Transcription machinery [BR:
sve03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
SVEN_4128
DNA repair and recombination proteins [BR:
sve03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
SVEN_4128
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
IMD
DUF447_C
Motif
Other DBs
NCBI-ProteinID:
CCA57414
UniProt:
F2RH86
LinkDB
All DBs
Position
complement(4468063..4469703)
Genome browser
AA seq
546 aa
AA seq
DB search
MSGPLIVQSDKTLLLEVDHELADDCRRAIAPFAELERAPEHIHTYRLTPLGLWNARAAGH
DAEQVVDALVEYSRYPVPHALLVDIAETMDRYGRLTLSKHPAHGLVLTSTDRPVLEEILR
SRKVQPLVGERIDPDTVVVHPSERGQIKQTLLKLGWPAEDLAGYVDGEAHRIDLAEDGWA
LRPYQKQAVEGFWHGGSGVVVLPCGAGKTLVGAGAMAQAKATTLILVTNTVSARQWKHEL
VKRTSLTEDEIGEYSGTKKEIRPVTIATYQVLTTKRKGIYPHLELFDSRDWGLIVYDEVH
LLPAPVFKFTADLQARRRLGLTATLVREDGRESDVFSLIGPKRFDAPWKEIEAQGYIAPA
DCVEVRVNLTDSERLAYATAEAEEKYRFCATTATKRKVTEALVKKFEGQQILVIGQYIDQ
LDELGEHLDAPVIKGETPNAQREKLFDAFRTGEISVLVVSKVANFSIDLPEATVAIQVSG
TFGSRQEEAQRLGRVLRPKADGHQAHFYSVVARDTIDQDFAAHRQRFLAEQGYAYRIVDA
DELLGS
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
gtgagtggaccgctcatcgtccagagtgacaagacgctgctcctggaggtcgaccacgag
ctcgccgacgactgccgccgggccatcgcgccgttcgccgagctggagcgggcgcccgag
cacatccacacgtaccggctgacgccgctcgggctgtggaacgcgcgggccgccgggcac
gacgccgagcaggtcgtcgacgcgctcgtcgagtactcccgctaccccgtcccgcacgcc
ctgctcgtcgacatcgccgagaccatggaccggtacggccggctcaccctctccaagcac
cccgcccacgggctcgtgctgaccagcaccgaccggcccgtcctggaggagatcctgcgg
tcgcggaaggtgcagccgctcgtcggggagcggatcgaccccgacaccgtcgtcgtgcac
ccctccgagcgcgggcagatcaagcagaccctgctgaagctgggctggcccgccgaggac
ctcgccgggtacgtcgacggcgaggcgcatcgcatcgacctcgccgaggacggctgggcc
ctgcggccgtaccagaagcaggccgtcgaggggttctggcacggcgggtccggggtcgtc
gtactgccctgcggcgccgggaagacgctcgtcggcgccggggcgatggcccaggccaag
gccaccacgctcatcctcgtgaccaacaccgtctccgcccgccagtggaagcacgagctg
gtgaagcggacctcgctcaccgaggacgagatcggcgagtacagcggtacgaagaaggag
atccggccggtcaccatcgccacgtaccaggtgctcacgaccaagcggaaggggatctat
ccccacctggagctgttcgactcccgggactgggggctcatcgtctacgacgaggtgcac
ctgctccccgcgcccgtcttcaagttcacggccgatctgcaggcccgccggaggctcggg
ctcaccgccaccctcgtccgcgaggacgggcgggagtcggacgtgttctcgctcatcggg
cccaagcggttcgacgcgccctggaaggagatcgaggcccaggggtacatcgcgcccgcc
gactgcgtcgaggtgcgggtgaacctgaccgactccgagcggctcgcgtacgccaccgcc
gaggccgaggagaagtaccgcttctgcgcgacgaccgcgacgaagcggaaggtcaccgag
gcgctggtgaagaagttcgaggggcagcagatcctcgtcatcggccagtacatcgaccag
ctcgacgagctcggcgagcacctcgacgcgcccgtcatcaagggggagaccccgaacgcc
cagcgcgagaagctcttcgacgccttccgcaccggcgagatcagcgtgctcgtcgtgtcg
aaggtcgccaacttctccatcgacctgcccgaggcgaccgtcgccatccaggtgtccggc
acgttcggctcccgccaggaggaggcgcagcgtctcggccgggtgctccgcccgaaggcc
gacggccaccaggcgcacttctactcggtggtcgcccgcgacaccatcgaccaggacttc
gccgcgcaccggcagcggttcctcgccgagcagggctacgcctaccgcatcgtcgacgcg
gacgagctgctggggtcgtag
DBGET
integrated database retrieval system
