Streptomyces venezuelae: SVEN_4407
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Entry
SVEN_4407 CDS
T02274
Name
(GenBank) DNA-directed RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
sve
Streptomyces venezuelae
Pathway
sve03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sve00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SVEN_4407
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sve03021
]
SVEN_4407
03400 DNA repair and recombination proteins [BR:
sve03400
]
SVEN_4407
Enzymes [BR:
sve01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SVEN_4407
Transcription machinery [BR:
sve03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SVEN_4407
DNA repair and recombination proteins [BR:
sve03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SVEN_4407
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
CCA57693
UniProt:
F2RJV9
Structure
PDB
PDBj
LinkDB
All DBs
Position
4749501..4750523
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AA seq
340 aa
AA seq
DB search
MLIAQRPSLTEEVVDEFRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTDLILNIKQLVVSSEHDEPVVMYLRKQGPGLVTAADIAPPAGVEVHN
PDLVLATLNGKGKLEMELTVERGRGYVSAVQNKQVGQEIGRIPVDSIYSPVLKVTYKVEA
TRVEQRTDFDKLIVDVETKQAMRPRDAMASAGKTLVELFGLARELNIDAEGIDMGPSPTD
AALAADLALPIEELELTVRSYNCLKREGIHSVGELVARSEADLLDIRNFGAKSIDEVKAK
LAGMGLALKDSPPGFDPTAAADAFGADDDADAGFVETEQY
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgcttatcgctcagcgtccttcgctgaccgaagaggtcgtcgacgagttccgctcccgg
ttcgtgatcgagccgctggagccgggcttcggctacaccctcggcaactccctccgccgt
accctcctctcctcgatcccgggtgccgctgtcaccagcatccgcatcgacggtgtcctg
cacgagttcaccaccgtgccgggcgtcaaggaggacgtcaccgacctcatcctcaacatc
aagcagctggtcgtctcctcggagcacgacgagccggtcgtgatgtacctgcgcaagcag
ggcccgggtctggtcaccgccgccgacatcgcgcccccggccggtgtcgaggtgcacaac
cccgacctcgtcctcgccacgctcaacggcaagggcaagctggagatggagctgaccgtc
gagcgcggtcgcggctacgtctccgccgtgcagaacaagcaggtcggtcaggagatcggg
cgcatcccggtcgactcgatctactcgccggttctcaaggtcacctacaaggtcgaggcg
acccgagtcgagcagcgcaccgacttcgacaagctgatcgtcgacgtcgagaccaagcag
gccatgcgcccgcgtgacgccatggcgtccgccggcaagaccctggtcgagctgttcggt
ctggcgcgcgagctcaacatcgacgccgagggcatcgacatgggcccgtcccccacggac
gccgccctcgccgccgacctggcgctgccgatcgaggagctcgagctcaccgttcgttcg
tacaactgcctcaagcgcgagggcatccactccgtgggtgagctcgtggcgcgctccgag
gcggacctgctcgacatccgcaacttcggtgcgaagtcgatcgacgaggtcaaggcgaag
ctggccggtatgggcctcgcgctgaaggactcgccgcccggattcgacccgaccgccgcg
gccgacgccttcggcgcggacgacgacgcggacgccgggttcgtcgagaccgagcagtac
tag
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