Streptomyces venezuelae: SVEN_5005
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Entry
SVEN_5005 CDS
T02274
Name
(GenBank) Diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
sve
Streptomyces venezuelae
Pathway
sve00300
Lysine biosynthesis
sve00470
D-Amino acid metabolism
sve01100
Metabolic pathways
sve01110
Biosynthesis of secondary metabolites
sve01120
Microbial metabolism in diverse environments
sve01230
Biosynthesis of amino acids
Module
sve_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sve00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SVEN_5005
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SVEN_5005
Enzymes [BR:
sve01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
SVEN_5005
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
NBD_C
Motif
Other DBs
NCBI-ProteinID:
CCA58291
UniProt:
F2R3R9
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All DBs
Position
5387939..5389330
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AA seq
463 aa
AA seq
DB search
MSRSAHPAGPRHADVLPEGHYTAPPADLNALDPKVWSRTVARDERGVVTVGGIGVTALAE
EFGTPAYFLDETDFRARCRAWAEAFGKDADVFYAGKAFLSRAVVRWLKEEGLNLDVCSGG
ELATALSAGMPAERIAFHGNNKSEAEIRRAVEAGVGRIVLDSFQEIVRVAHIAQSLGKRQ
RVQIRVTVGVEAHTHEFIATAHEDQKFGIALAGGQAAEAVRRALKLDGLELIGIHSHIGS
QIFDMAGFEVSARRVVQLLAEVRDEHGVELPEIDLGGGLGIAYTSEDDPREPHEIAKALG
EIVTRECESAGLATPRISVEPGRAIVGPTAFTLYEVGTVKPLEGLRTYVSVDGGMSDNIR
TALYDAEYSVSLVSRTSDAAPMLSRVVGKHCESGDIVVRDAFLPSDLAPGDLIAVPATGA
YCRSMASNYNHAQRPPVVAVRDGEARVIVRRETEEDLLRLDVG
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgttccgcccaccccgcagggccccgccacgccgacgtcctccccgagggccac
tacaccgcgccccccgccgacctcaacgccctcgaccccaaggtgtggtcgcggaccgtc
gccagggacgagcggggcgtcgtcaccgtcggcgggatcggcgtcaccgcgctcgccgag
gagttcgggacgcccgcctacttcctcgacgagaccgacttccgcgcccgctgccgcgcc
tgggccgaggccttcggcaaggacgccgacgtcttctacgccgggaaggcgttcctctcg
cgggccgtcgtgcggtggctgaaggaggaggggctgaacctcgacgtgtgctccggcggc
gaactcgccacggccctctccgccgggatgcccgccgagcgcatcgccttccacggcaac
aacaagagcgaggcggagatccgcagggccgtcgaggccggggtcggccggatcgtgctc
gactcgttccaggagatcgtgcgcgtcgcgcacatcgcgcagtcgctcggcaagcggcag
cgggtgcagatccgggtgaccgtcggcgtcgaggcccacacccacgagttcatcgccacc
gcccacgaggaccagaagttcgggatcgcgctggccggcgggcaggccgccgaggccgtc
cggcgcgcgctgaagctcgacggcctggagctcatcggcatccactcgcacatcggttcg
cagatcttcgacatggccggcttcgaggtgtccgcgcggcgcgtcgtccagctgctcgcc
gaggtccgcgacgagcacggcgtggagctgcccgagatcgacctcggtggcggcctcggc
atcgcgtacacctccgaggacgacccgcgcgagccgcacgagatcgccaaggccctcggt
gagatcgtcacgcgggagtgcgagtccgccggtctcgccaccccccgcatctccgtcgag
ccggggcgcgccatcgtcggccccaccgccttcaccctgtacgaggtggggacggtcaag
ccgctggaggggctgcggacgtacgtctccgtggacggcggcatgtcggacaacatccgc
accgcgctctacgacgccgagtacagcgtcagcctcgtctcgcggaccagcgacgccgcg
cccatgctctcccgggtcgtcggcaagcactgcgagagcggcgacatcgtcgtacgggac
gccttcctgccctcggacctggcgcccggcgacctcatcgccgtgccggccaccggcgcg
tactgccgctccatggccagcaactacaaccacgcgcagcggccgccggtcgtggccgtc
cgggacggcgaggcgcgggtcatcgtgcggcgcgagacggaggaagatctcctgcgtctc
gacgtcgggtga
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