Streptomyces venezuelae: SVEN_5826
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Entry
SVEN_5826 CDS
T02274
Name
(GenBank) Ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
sve
Streptomyces venezuelae
Brite
KEGG Orthology (KO) [BR:
sve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sve03016
]
SVEN_5826
Enzymes [BR:
sve01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
SVEN_5826
Transfer RNA biogenesis [BR:
sve03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
SVEN_5826
BRITE hierarchy
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
DUF6302
Motif
Other DBs
NCBI-ProteinID:
CCA59112
UniProt:
F2RAP3
LinkDB
All DBs
Position
complement(6345221..6346504)
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AA seq
427 aa
AA seq
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MTDAQETAADTALRTTGGGPPDDDVPANGLPIPLLEPREGIPPVVETEDALAEVIAAFAA
GRGPVAVDAERASGYRYGQRAYLVQLRREGAGTALIDPVGCPDLSGLGDALAGTEWILHA
ATQDLPCLRDIGMLPTSLFDTELAGRLAGFPRVGLGAMVESVLGYALEKGHSAVDWSTRP
LPEPWLRYAALDVELLVDLRDALEKELDRQGKLEWAHQEFDAIAAAPPAPPRKDPWRRTS
GMHKVRRRRQMAVVRELWTARDKVAQRRDVSPGKVLSDAAIVEAALAVPVNVTALMALPG
YGHRMGRRQLEQWQAAVDRARALPESELPQPGQQVAGPPPPRAWADKDPAAAARLSAART
AVSALAEELNLPQENLITPDTVRRVCWEPPTPGTPDTVAAALTGYGARPWQVGLVTPLLV
EALTAKA
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacgcccaagagaccgcagcagacacagcactgcgcaccaccgggggcggcccc
ccggacgacgatgtccctgcgaatgggcttccgatcccgttgctggagccccgcgagggg
attccgcccgtcgtcgagaccgaggacgccctcgccgaggtgatcgccgccttcgcggcg
ggccgcggcccggtcgccgtggacgccgagcgcgcctccggctaccgctacggccagcgc
gcctacctcgtccagctccgccgcgagggcgcgggcaccgcgctcatcgacccggtgggc
tgccccgacctctccggactcggcgacgcgctcgccggcaccgagtggatcctgcacgcc
gcgacccaggacctcccgtgcctgcgcgacataggcatgctcccgacctcgctgttcgac
accgagctcgccgggcgcctcgccggcttcccgcgggtcggcctcggcgcgatggtcgag
tccgtcctcggctacgccctggagaagggccactccgcggtcgactggtccacccggccg
ctgcccgagccctggctgcgctatgcggccctcgacgtggagctcctcgtcgacctccgg
gacgccctggagaaggagctcgaccggcaggggaagctggagtgggcgcaccaggagttc
gacgcgatcgccgccgcgccgcccgccccgccgcgcaaggacccgtggcgccggacctcc
ggcatgcacaaggtgcgccgccgtcgccagatggcggtcgtacgggagctgtggacggcc
cgtgacaaggtcgcccagcggcgtgacgtctcccccggcaaggtgctgagcgacgcggcg
atcgtggaggcggcgctcgcggtgccggtgaacgtgaccgcgctcatggccctgcccggt
tacgggcaccggatgggccgccgtcagctggagcagtggcaggcggccgtcgaccgcgcc
cgcgccctgccggagagcgagctgccccagccgggccagcaggtggcgggcccgccgccg
ccgcgcgcctgggcggacaaggacccggccgccgcggcccgcctctcggcggcccgcacg
gcggtctcggccctcgcggaggaactgaacctcccgcaggagaacctgatcaccccggac
acggtccgacgggtctgctgggagccgccgacgccgggcaccccggacacggtcgccgcc
gccctcaccggctacggcgcccgcccctggcaggtggggctcgtgaccccgctgctggtc
gaggccctgacggcgaaggcgtga
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