Streptomyces venezuelae: SVEN_5927
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Entry
SVEN_5927 CDS
T02274
Name
(GenBank) DNA topoisomerase IB (poxvirus type)
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sve
Streptomyces venezuelae
Brite
KEGG Orthology (KO) [BR:
sve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sve03032
]
SVEN_5927
03400 DNA repair and recombination proteins [BR:
sve03400
]
SVEN_5927
Enzymes [BR:
sve01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
SVEN_5927
DNA replication proteins [BR:
sve03032
]
Prokaryotic type
DNA Topoisomerases
SVEN_5927
DNA repair and recombination proteins [BR:
sve03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SVEN_5927
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
CCA59213
UniProt:
F2RAZ4
LinkDB
All DBs
Position
complement(6453732..6454757)
Genome browser
AA seq
341 aa
AA seq
DB search
MVRLRTSDPHAPGWRRVRHGRGFRYLDADGRPLPAADRERVRALVIPPAWRGVWVCPWPN
GHIQAVGTDDAGRRQYLYHPDFRARREAAKHAHVQEVARSLPRLRRRVARDLAGRGLTRT
RVLACLTRLLDLGFLRIGGERYVHENGSYGLTTLLREHASCRNGEIRLDFPAKSGRTVTR
TLVDEQAHAVVRALLRRKDPGPRLFAYWEHAAWHEVHAEDLNAYLRERAGEDVTAKDFRT
WYATVLAAVALAVSESTSDASTARRKKVVARAVREVSGYLGNTPAVCRASYIDPRVVERY
EDGRTVAAALGKLGEDGLFGRPATHGAVERAVLELLRDDDL
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
gtggtgcgcctgaggaccagcgacccgcatgcgccggggtggcgccgggtgcggcacggc
cgggggttccggtacctggacgccgacggccggccgctccccgcggccgaccgcgagcgg
gtccgcgccctggtgataccgccggcctggcggggcgtgtgggtctgcccctggccgaac
ggccacatccaggcggtggggacggacgacgccgggcgccgccagtacctctaccacccc
gacttccgtgcccggcgggaggccgccaagcacgcgcacgtgcaggaggtggcgcgctcg
ctgccgcggctgcgcaggcgggtggcgcgcgacctcgccggtcgcggcctcaccaggacc
agggtgctggcctgtctgacccggctgctcgacctgggtttcctgcgcatcggcggggag
cggtacgtgcacgagaacgggagctacggcctcaccacgttgctgcgggagcacgccagc
tgccggaacggggagatccggctggacttccccgccaagtcgggcaggaccgtcacgcgg
acgctggtggacgagcaggcccacgcggtcgtacgggccctgctgcggcggaaggatccg
ggcccgaggctgttcgcgtactgggagcacgcggcgtggcacgaggtccacgccgaggac
ctcaacgcgtacctgcgcgagcgggcgggcgaggacgtcaccgccaaggacttcaggacc
tggtacgccaccgtgctggccgcggtggccctggccgtctccgagagcacctccgacgcg
tccaccgcccggcggaagaaggtcgtggcccgtgccgtgcgcgaggtgagcggctacctg
gggaacacgcccgccgtctgccgcgcgtcatacatcgatccgcgcgtcgtcgagcggtac
gaggacgggaggaccgtcgccgcggccctcgggaaactcggggaggacggcctcttcggc
cgtccggccacgcacggcgccgtcgagcgcgccgtcctggagctcctgcgggacgacgac
ctgtga
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