Solanum verrucosum: 125807478
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Entry
125807478 CDS
T11474
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
sver Solanum verrucosum
Brite
KEGG Orthology (KO) [BR:
sver00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sver03036
]
125807478
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
sver00535
]
125807478
Chromosome and associated proteins [BR:
sver03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
125807478
Meiosis-specific proteins
Cohesin complex and associated proteins
125807478
Proteoglycans [BR:
sver00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
125807478
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_23
AAA_15
AAA_29
Motif
Other DBs
NCBI-GeneID:
125807478
NCBI-ProteinID:
XP_049343157
LinkDB
All DBs
Position
Unknown
AA seq
1201 aa
AA seq
DB search
MYIKQVIIEGYKSYREQVATEDFSPKVNCVVGANGSGKSNFFHAIRFVVSDLFHNLRSEE
RQALLHEGAGHQVLSAFVEIVFDNSDNRMPVDKEEVRLRRTVGLKKDEYFLDGKHITKTE
VQNLLESAGFSRSNPYYVVQQGKIASLTLMKDSERLDLLKEIGGTRVYEERRQESLKIMQ
ETGNKRKQIIQVVQYLDERLNELEQEKEELKKYQQLDKQRKSLEYTIFDKELHDARQKLN
EVEEARNKVAENSTKMYESVLEAHEKSKELEKLSKDLTKEIQILSKEKEAVEKQRTEAIR
KRAKLDLDYKDLQEKMSTNIKAKDDAQKQLMILEREVQETKNALNDIKPLHEKQVKEEED
ITRGIMDREKRLSILYQKQGRATQFASKAARDKWLQKEIDEYERVLSSTLMQEKKLQDEI
DQLKKDMRDQDDIIKVRKVEVDKKETFISGYRNAYNQYKVDRDKLHDERKSLWTQETELT
TEIERLKAEVVKAEKSLDHATPGDIRRGLNSVRRICREYEISGVFGPIFELLECEDKFFT
AVEVTAGNSLFHVVVDNDETSTKIIRHLNAQKGGRVTFIPLNRVKKPHVNYPQGSDVIPL
LKKLRFSDSYCRAFEQVFARTVICRNLDVATRVARTDGLDCITLEGDQVSKKGGMTGGFY
DHRRSKLRFMSTIKQNTVSINLKERELEEVRYKLQDIDQKINELVAEQQKNDAGLGHDKS
ELEQLKQDILNAERQKQSILKALQKKEKLLGNILNQIDQLRASIAMKQDEMGTELVDHLT
PEERDSLSRLNPEITTLKEQLIACRANRIETETRKEELEMNLSTNLERRKQELMAMNSSV
DVDMLQAEVESKYQELKDADALVDHVTKELTRVSRNIDERNKRLKQIKQEKDNLKALEDK
YQNTLQDEARELEQMLSKRNIYLAKQEEYSKKIRELGPLSSDAFETYKRRNVKELYKMLH
KCNEQLQQFSHVNKKALDQYVNFTEQREELQRRQAELDAGDEKIKELISVLDMRKDESIE
RTFKGVAKHFREVFSQLVQGGHGFLVMMKKKDGEEDDNDPDDDEPRADAEGRVEKYIGVK
VKVSFTGQGETQSMKQLSGGQKTVVALALIFAIQRCDPAPFYLFDEIDAALDPQYRTAVG
NMVRDLADRGSTQFITTTFRPELVKVADKIYSVSHKNRVSKVTVVSREGALDFIEQDQSH
N
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
atgtatataaaacaggtcatcattgaaggatataagagttatcgggaacaagtagccact
gaagatttcagtccaaaagttaactgtgttgttggtgcaaatggatctggcaagtctaac
tttttccatgcaatccgttttgtcgtaagcgacctctttcacaatctgcgcagtgaagaa
agacaggctttgcttcatgaaggagcaggtcaccaagtgttatctgcttttgtggaaatt
gtatttgataattcagacaatcgaatgccggttgataaggaggaagtacggctgagaaga
acagtcggtctcaagaaggatgagtatttcttggatggaaaacatatcacgaagacagag
gtccagaatttgctggaaagtgctgggttttctcggtctaatccctattatgttgtgcag
cagggaaagatagcatcattgacattaatgaaggattcagaacgacttgatctactgaag
gaaattggagggacacgtgtttatgaggagaggcgtcaagaaagtttaaaaatcatgcag
gaaactggtaacaagagaaagcaaattattcaagttgttcaatacttggacgagagattg
aatgagcttgaacaagagaaggaggaactgaaaaagtatcaacagcttgacaagcagcgt
aaatctctggaatacacaatttttgacaaagaacttcatgatgcacgccagaaattgaac
gaggtagaagaggctcgaaacaaagttgccgagaactctactaagatgtatgagagtgtg
ctggaggctcatgaaaagtccaaggagctggagaagttgtccaaagatctgacaaaagaa
attcaaattttaagcaaggagaaagaagcagtagagaaacagcggacagaggctattaga
aagcgagccaagcttgatcttgattacaaagaccttcaagagaagatgtccacaaatatt
aaagctaaagatgatgcacagaaacaactcatgattctggagcgagaagttcaagaaaca
aagaatgcactcaatgatatcaagcctttgcatgagaaacaagtaaaagaggaggaggac
atcactagagggattatggaccgtgaaaagagacttagcattctttatcagaaacaaggc
cgtgccacccaatttgcgagcaaagctgctcgggacaaatggctccaaaaagaaattgat
gaatatgagcgagttttatcttcaaccttaatgcaggagaaaaagcttcaagatgaaatt
gatcagctcaaaaaagacatgagagatcaagatgatataatcaaagttcgtaaagttgaa
gtggacaaaaaagaaaccttcatatctggttatcgaaatgcttataatcagtataaagtg
gatagagacaaactgcatgatgagaggaagtctctgtggacacaggagactgaactgact
actgaaattgaacggctcaaggctgaagttgtgaaggcagagaaaagcctagatcatgca
actcctggtgatataagaaggggtctgaactctgtaaggaggatttgcagagagtatgaa
atctctggagtatttggaccaatttttgagttgcttgaatgtgaggacaagttttttaca
gctgttgaagttactgctggaaacagcttattccatgttgtggttgataatgatgaaaca
tcaacaaaaattattagacacctcaatgctcaaaaaggtggacgagttacatttattcca
ttgaacagggttaaaaaaccacatgttaattatccacagggctctgatgtgattccgctt
ctgaagaaattgaggttttctgattcatattgtagggcatttgagcaggtgtttgcaaga
actgtaatttgtcgaaatctggatgttgccaccagggttgctcgtaccgatgggcttgac
tgtatcactctggaaggtgaccaagttagtaaaaaaggtggcatgactggtggattttat
gatcatagacgctcaaaattgaggtttatgagcaccatcaaacagaatacagtgtccatc
aacctgaaggagcgtgaacttgaggaagttagatataaacttcaagatatagaccagaaa
attaatgaacttgtggctgagcagcagaaaaatgatgctggcctgggtcacgacaagtct
gagttagaacagcttaaacaagacattcttaatgctgaaagacagaaacaatccatctta
aaagctcttcaaaagaaggagaaactgcttggtaatattctgaatcaaatagatcagctc
agagctagtatagctatgaaacaagatgaaatgggaacagaacttgttgaccatttaacg
ccggaagagcgagattctttgtcacgtttgaaccctgaaatcacgactctgaaggagcag
ctgattgcttgcagggcaaatcggatagagactgaaactagaaaagaggagcttgagatg
aatctgtcaacaaatcttgaaagacgaaagcaagagttaatggctatgaattcttctgtc
gacgttgatatgctacaggctgaagttgagagcaagtatcaggaacttaaggatgcggac
gcactagttgatcatgtcactaaagagcttacaagggtttctcgaaacatagatgaacga
aacaagaggctcaagcagatcaaacaggaaaaggataatctgaaggctcttgaagataag
tatcagaatacacttcaggatgaagcaagagaactggaacagatgctaagtaaacggaac
atctatcttgccaagcaagaagaatactctaagaaaattcgggaactgggtcctttatct
tctgatgcctttgagacgtacaaaagaaggaacgtaaaagaattatataagatgctgcac
aagtgtaacgagcagctgcaacagttcagccatgtaaacaaaaaggcacttgatcaatat
gtaaattttaccgagcaaagagaagaactccaaagaaggcaagctgaactggatgctggg
gatgagaaaatcaaggaacttatatctgttctggatatgaggaaggatgaatcaattgag
cgcacgttcaagggcgtggctaaacatttccgtgaagtattctctcagcttgttcaagga
ggtcatgggttcttagttatgatgaagaaaaaggatggtgaggaagatgacaatgatcct
gatgatgatgagccgcgtgctgatgcagagggaagagttgagaaatatattggtgtgaaa
gtgaaggtgtcgttcactggacaaggagaaacacagtcaatgaaacaattatcagggggc
cagaaaactgtggtagcactggcacttatatttgccatacaaagatgtgatcctgcccca
ttttatctttttgatgagatagatgcagcactagatcctcagtacagaacagctgtgggg
aatatggttcgtgatttggcagacaggggtagcacgcaatttatcacgacgacatttcgc
ccggagctcgtgaaagtggctgataagatatatagtgtgagccacaaaaatagagttagc
aaggtcactgttgtatccagggaaggagccttagattttattgagcaggatcaatcacat
aactga
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