Solanum verrucosum: 125807657
Help
Entry
125807657 CDS
T11474
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen2-1-like
KO
K15322
tRNA-splicing endonuclease subunit Sen2 [EC:
4.6.1.16
]
Organism
sver Solanum verrucosum
Brite
KEGG Orthology (KO) [BR:
sver00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sver03016
]
125807657
Enzymes [BR:
sver01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
125807657
Transfer RNA biogenesis [BR:
sver03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
125807657
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
FLYWCH_N
Motif
Other DBs
NCBI-GeneID:
125807657
NCBI-ProteinID:
XP_049343351
LinkDB
All DBs
Position
Unknown
AA seq
243 aa
AA seq
DB search
MGSRWKGKGAEVQALADPISEIVSQLQSSLISSNSKGLLSGTGVLLKADAELTDLLNRAC
FGRPRVTLEKNEQWFQLSTEEAFYLQHSLKCIKIVDHNDTELNGDELWKHMTSSRENFPI
LFKAFSHLRSKNWVVRSGSQYGVDFVAYRHHPALVHSEYAVLVLSAQDGNANGRLKVWSD
FHCTLRLCGSVAKTLLILNIEEQQSCATSPSCLDNYVVEERTITRWSPEQGREKNVKSDS
RVK
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atggggtcaaggtggaaaggaaaaggagcagaagttcaagctcttgcagatcccatttca
gaaatagtcagccaactccaatcttctctgatcagctccaattctaaaggactgctttct
ggtacgggtgtgcttcttaaagcagatgcagaactaactgacctcctcaatcgtgcatgt
tttggtaggcctagggtaacattagaaaagaatgagcaatggtttcagctctccacggaa
gaagctttttatcttcaacattctctaaaatgcattaagattgttgaccacaatgatact
gaactgaacggtgacgagttatggaagcatatgacatcaagcagggaaaattttcctatc
ctattcaaagctttttctcaccttcgaagtaagaactgggtggttagatcgggctctcag
tatggggtagactttgttgcctatcgtcatcatcctgccttggtacattctgaatatgct
gtgctagttttatcagcacaagatggtaatgcaaatggccgcttgaaggtttggtccgac
ttccactgcactcttcgcctttgtggtagtgtggcgaaaacattattaattctcaacatt
gaagaacagcaaagttgtgcaacttctccgtcgtgcttagataattatgttgttgaagag
agaacaatcacaagatggagtccagagcaaggccgtgagaaaaatgttaaatctgactca
agagtaaagtag
DBGET
integrated database retrieval system
