KEGG   Solanum verrucosum: 125808016
Entry
125808016         CDS       T11474                                 
Name
(RefSeq) sm-like protein LSM8
  KO
K12627  U6 snRNA-associated Sm-like protein LSm8
Organism
sver  Solanum verrucosum
Pathway
sver03018  RNA degradation
sver03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sver00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    125808016
  09123 Folding, sorting and degradation
   03018 RNA degradation
    125808016
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sver03019]
    125808016
   03041 Spliceosome [BR:sver03041]
    125808016
Messenger RNA biogenesis [BR:sver03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     125808016
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     125808016
Spliceosome [BR:sver03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    125808016
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 125808016
NCBI-ProteinID: XP_049343741
LinkDB
Position
Unknown
AA seq 98 aa
MATGLGLESLVDQTISVITNDGRNIVGVLRGFDQATNLILDESHERVYSTKEGVQQLVLG
LYIIRGDNISVVGELDEDLDSNLDMSKLRAHPLKPVVH
NT seq 297 nt   +upstreamnt  +downstreamnt
atggcaactggacttgggcttgagtctcttgttgatcaaactatctcagttattacaaat
gatggacggaatattgtgggagttctgagaggattcgaccaggctacaaacttgattctt
gatgaatctcatgagagagtatattcaacaaaggaaggtgtacagcaacttgtgttaggt
ctttatatcataaggggggacaacataagcgtcgttggggaattagatgaagatctggat
agtaacttggatatgtcaaaactgagagcacatcctctaaagccagttgttcactga

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