KEGG   Solanum verrucosum: 125808788
Entry
125808788         CDS       T11474                                 
Name
(RefSeq) sm-like protein LSM5
  KO
K12624  U6 snRNA-associated Sm-like protein LSm5
Organism
sver  Solanum verrucosum
Pathway
sver03018  RNA degradation
sver03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sver00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    125808788
  09123 Folding, sorting and degradation
   03018 RNA degradation
    125808788
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sver03019]
    125808788
   03041 Spliceosome [BR:sver03041]
    125808788
Messenger RNA biogenesis [BR:sver03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     125808788
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     125808788
Spliceosome [BR:sver03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    125808788
SSDB
Motif
Pfam: LSM DUF7452 Ntox4
Other DBs
NCBI-GeneID: 125808788
NCBI-ProteinID: XP_049344407
LinkDB
Position
Unknown
AA seq 88 aa
MSSNNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITSEG
RRITKLDQILLNGNHIAILVPGGSPPDE
NT seq 267 nt   +upstreamnt  +downstreamnt
atgtcttcgaacaacccttctcagcttcttccttctgagttgattgatcgttgcattggt
tcaaagatatgggtgataatgaagggtgataaggagcttgttggtacacttagaggattt
gatgtttatgttaacatggttcttgaagatgttactgaatatgagatcacttctgaaggg
cggaggataacaaaacttgatcagatattgctcaatggaaaccacattgctatcctggtt
ccaggtgggtcgccacctgatgaatga

DBGET integrated database retrieval system