Solanum verrucosum: 125809027
Help
Entry
125809027 CDS
T11474
Name
(RefSeq) E3 ubiquitin-protein ligase UPL6
KO
K10589
ubiquitin-protein ligase E3 C [EC:
2.3.2.26
]
Organism
sver Solanum verrucosum
Pathway
sver04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sver00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125809027
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sver04121
]
125809027
Enzymes [BR:
sver01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
125809027
Ubiquitin system [BR:
sver04121
]
Ubiquitin ligases (E3)
HECT type E3
125809027
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
125809027
NCBI-ProteinID:
XP_049344657
LinkDB
All DBs
Position
Unknown
AA seq
1030 aa
AA seq
DB search
MFFSGDPSTRKRVDLGGRSSKERDRQKLLEQTRLERNRRLWLRQQNSAALKIQKCFRGRK
EVETERSKVRENFLKTHGERCHTVDRQCFSPDSDFLRHLLFFFNPTYTTDVSVLVETCRS
LLEFVRDNGDVVSLFAGTEYASKAALVRYRVKKFTHACIRAVYGNRNKLRDQLFMESKKS
CTSAILLLDAVTLLIDLGLPWACSTVTYLLQRNIYSLFREIVLIGKDRSFPASNRVVSSF
ERVLGLITSHIGQGTCTCPIVDPQCFFPSQILTIPFLWRFFPHLKEIFASPSVSRHYFHQ
MKLCMKDHINVLPPDIAIDLPGYACLLGNLLEVAGLAFAQPESFTMAVDFATVATFLLEA
LPSLQSSNMGSREISEDEMVIDDEQTEKVLNLGLEQQITNAIDPRFLLQLTTVLLGGFSP
LNGSHSGQLEENHIAAVTAVCAFLHATFNILPLERIMTVLAYRTELVPVLWNFMKQCHEN
QKWSSLSEQSPYLPADAPGWLLPLSVFCPVYKHMLMIVDNEEFYEQEKPLSLKDIRCLIV
ILRQALWQLLWLNPTVPANCGKSTTAIFAMKKHPLEFLQHRVCVVASELLSQLQDWNNRR
QFTPPSEFHADGVNEYFISQAMMENTRANDILKQAPFLVPFTSRAKIFTSQLAEARQRNG
SQGLFARHRFRIRRDHILEDAFNQLNALSEEDLRGLIRVTFVNELGVEEAGIDGGGIFKD
FMENITRAAFDVQYGLFKETVDHLLYPNPGSGMVHDQHLQYFHFLGTVLAKAMFEGILVD
IPFATFFLSKLKQKYNYLNDLPSLDPELYRHLIFLKHYEGDVSDLELYFVILNNEYGEQT
EEELLPGGKSTRVTNENVITFIHLVANHRLNFQIRQQSSHFLRGFQQLIQKEWIDMFNEH
ELQLLISGSLDGIDIDDLRAHTNYTGGYHKEHYVIDMIWEVVKNFSLENQRKFLKFVTGC
SRGPLLGFKYLEPLFCIQRAGGHASDEALDRLPTSATCMNLLKFPPYRSKEQMEQKLLYA
INADAGFDLS
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgtttttctccggtgatccttcgacgaggaagcgagtcgatttgggtggccgcagctcc
aaggaacgtgaccgacagaagcttctagagcagactcgtttagagcggaatcgtcgcctc
tggttgcgtcagcagaactctgctgccctcaaaattcagaaatgcttcagaggtagaaag
gaggttgaaactgaacgttctaaagttcgcgagaatttcttgaaaactcatggggaacgc
tgccacactgttgacaggcagtgcttcagtccagattcagattttctgcgtcacctactt
ttctttttcaatccaacatacactactgatgtttctgtccttgtggagacatgccgatcg
cttctagagtttgttcgagataacggggatgttgttagcctctttgctggtacggaatat
gcttccaaagctgccttggtgagatacagagtgaagaaattcactcatgcttgtattcgg
gctgtttatggaaacaggaataagttgagagatcaactatttatggaatctaagaagtcc
tgtacatcagcaatcctcttgttggatgcagtaacattgttgattgatttagggcttcct
tgggcttgcagcactgtcacctatcttcttcaaagaaatatatattccttatttcgggaa
attgttctgattggcaaggatagaagctttccagcttccaacagggttgtatcttcattc
gagcgcgtgcttggactaattacatctcatattggtcaaggcacttgtacttgcccaatt
gttgatccacaatgtttctttccctcccagattcttacaattccatttttatggcggttt
ttccctcacctgaaagagatctttgcaagtccatcagtgagtcgtcattattttcatcag
atgaaattatgcatgaaagaccatattaatgtcctccctcctgatatagcgattgatctt
cctggttatgcttgccttcttgggaatctattggaagttgccgggcttgcttttgctcag
ccagaatcattcactatggctgttgattttgctactgttgcgacatttttgttggaagca
ctcccttctctccaatcatcaaatatgggaagtagagaaatttctgaggatgaaatggtc
attgatgatgaacaaacagaaaaagttctgaatttgggtttggagcaacagataaccaat
gctatagatccacgttttctcctacagctgactactgtgttacttggtgggttttcacct
ctcaatggttcacatagtggccagcttgaagaaaatcatatagcagctgttactgcagtt
tgtgctttccttcatgcgactttcaacattttaccgcttgaacgtattatgactgtacta
gcctatcggacagaactagttcctgtcctttggaacttcatgaaacaatgccatgaaaat
cagaaatggtcatccttgtcagaacaatcaccatatttgccagcagatgctcctggatgg
ctgctacctttatctgttttctgccctgtttataagcacatgcttatgattgttgataat
gaggagttctatgaacaggagaagccattatctctgaaggatatcagatgtttgattgtt
atccttagacaggccttgtggcagctcctctggttgaaccctacagtgcctgctaactgt
ggtaaatcaacaactgctatttttgctatgaagaagcatccgttagagttccttcagcac
agggtctgtgttgtagcatctgaactcctatcacagttacaagattggaacaacagacgg
caatttacacctcctagtgaatttcatgctgatggtgtaaatgaatatttcatatctcag
gcaatgatggagaatactagagccaacgatatactaaagcaagctccattcctggtgcca
tttactagccgagccaaaatatttacttcacaactcgctgaagcaagacaaaggaatggg
agccagggtctctttgctaggcatagattcagaattagaagagaccatattctggaagat
gcttttaaccaattgaatgcattgtcggaggaggatctccgtgggctgatacgcgtgact
tttgtcaacgaacttggagttgaggaagctggtatagatggtggtgggatattcaaggat
ttcatggagaatattactcgagcagcttttgatgtacaatatggattatttaaggaaact
gtggatcatctactctatccgaatcctggatctgggatggttcatgatcaacacctccag
tattttcattttctggggacagttcttgctaaggcaatgtttgaaggcatccttgttgat
attccatttgcaacattctttttgagcaagttgaagcaaaagtataactatttgaatgat
cttccttccttggatccagaattgtatcgccatctcatcttcctgaagcattacgaaggt
gatgtttcagatcttgagttatactttgtcattctcaacaatgaatatggagagcaaact
gaagaagagctgcttcctggtggtaaaagcacacgtgttactaatgaaaatgtcatcacc
tttattcatcttgttgctaaccatcgtttgaactttcagatccgtcaacaaagttctcat
tttctgaggggtttccaacagctaatacaaaaggagtggattgacatgtttaatgaacat
gaacttcagcttcttatttctggatcacttgatggcattgatattgatgaccttcgagct
cataccaattatacaggaggttaccataaggaacactatgttatcgatatgatttgggag
gttgtgaaaaacttttctttggaaaatcagagaaaatttctgaagtttgtgactgggtgt
tcacgaggacccttactcggatttaaatatttggagccgttgttctgcatacagagagcg
ggtgggcatgcttctgatgaagctcttgatcgtctgccgacatcagctacttgcatgaat
cttttaaaatttccaccatacagaagcaaagagcagatggagcagaaattgttatacgcc
ataaatgctgatgctggtttcgatttaagctga
DBGET
integrated database retrieval system
