Solanum verrucosum: 125810863
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Entry
125810863 CDS
T11474
Name
(RefSeq) protein CHROMATIN REMODELING 8
KO
K10841
DNA excision repair protein ERCC-6
Organism
sver Solanum verrucosum
Pathway
sver03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sver00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
125810863
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sver03036
]
125810863
03400 DNA repair and recombination proteins [BR:
sver03400
]
125810863
Chromosome and associated proteins [BR:
sver03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
125810863
DNA repair and recombination proteins [BR:
sver03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
125810863
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
WHD_Rad26_CSB
HDA2-3
ResIII
WHD_SOWAH
Motif
Other DBs
NCBI-GeneID:
125810863
NCBI-ProteinID:
XP_049346318
LinkDB
All DBs
Position
Unknown
AA seq
1213 aa
AA seq
DB search
MEEEEEDKILLSSLGVTSANPEDIERDVLDQATRHVGESNEATGIAEEEIEERKEVKEEG
HDKKLDLFNKLRAVEVEIDAIKDGFGHLERFRRNEEEVPDTDGCSEAKHTESEQRTIQAP
LDDSNLQHALADDRLRSLLETKAQLREELSIFANDTSPDALIRALVKDQPKSKRKVKEVQ
KSSNKKSKRRKTASLVDDDDFDAVLAAASSGFVETERDALVRKGMLTPFHKLKGFERRID
GAESSGRQSAAADTNSNDDDLASTSIAKAVQSISQAAQARPTTKLLDSASLPKLDAPAHP
FQRLRKPLKIPQSLEITTEKNGEFTRKKKRPLPSKKWRKLASREQRQDEGSDVNTSSHED
NTEDTEDVESSFVALEGGFKIPETIFNKLFDYQKVGVQWLWELHCQRAGGIIGDEMGLGK
TIQVLSFLGSLHFSDMYKPSIIICPVTLLRQWKREAKTWYPSFHVEILHDSAHDSSSKKK
QADSESDYESEDLLDSETEGKTSSRTSKKWDPVIARVVRSNSGLLITTYEQLRLLGEKLL
DIEWGYAVLDEGHRIRNPNAEVTLVCKQLQTVHRIIMTGAPIQNKLSELWSLFDFVFPGK
LGVLPVFEAEFAVPISVGGYANATPLQVSTAYRCAVVLRDLIMPYLLRRMKADVNANLPK
KTEHVLFCSLTKEQRSVYRAFLASSEVEQIFDGSRNSLSGIDVMRKICNHPDLLEREHSS
RDPDYGNPERSGKMKVVAEVLKVWKEQGHRVLLFSQTQQMLDILERFLVTCEYNYRRMDG
ITPVKQRMVLIDEFNNTDDIFIFILTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQARER
AWRIGQKKDVTVYRLITRGAIEEKVYHRQIYKHFLTNKILKNPQQRRFFKARDMKDLFTL
NDDGNGGSTETSSIFSQVSEDVNIVGAPDSQEKPSFQSPVVKDDYSKIGEADNSDPRGKA
GDDNNNGELDEETSILRGLFDAHGIHSAMNHDAIMNAHDEEKLKLEEQASQVAQRAAEAL
RQSRMLRSRESVAVPTWTGKSGAAGGPSSAKKKFGSTVNPQLTSKSSEESLNGYDAIRGN
AFPAGASAGKALSSAELLAKIRGNREKAVSDGLVHQFGTPASTSNSRAGSVSNGHRSASS
SSVVQPEVLVRQICTFIQQRGGKTNSASIVDYFRDRVPSKDLPLFKNLLKEIAILEKNPS
GSFWVLKSEYQDQ
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagaggaggaagataagattttactcagcagtttgggtgtgacctctgcgaat
cctgaagatattgaacgtgacgtcttggaccaggcaacaaggcacgttggggagagcaat
gaagctacagggattgctgaagaagagatagaggaaagaaaggaagtaaaggaagaagga
catgataagaaattagatttgtttaataaattgagagcagtagaagtagaaatagatgcg
attaaagatggctttggacatttggaacgcttcagaagaaatgaggaggaagtccctgat
actgatggttgcagcgaggcaaagcatacagagagtgagcaaaggaccattcaggcacca
ctggatgattcaaaccttcaacatgctttagctgatgatcgtctaagaagtcttcttgaa
acaaaggctcaactcagggaagaactttcaatttttgctaatgatacttcacctgatgca
ttgataagagctcttgttaaggatcaacctaaatctaaaagaaaggtgaaagaagttcag
aaatcaagcaacaagaagagcaaacggaggaagacggcatcgctggttgatgatgatgat
tttgatgcagtgttagctgcagcatcttctggatttgtggaaacagaaagagatgctctg
gtaagaaaaggaatgttaacccccttccacaagctcaaaggctttgaacgtcggatcgat
ggtgcagagtcttctggtagacaaagcgctgcagctgatacaaacagtaacgacgacgac
cttgcttccaccagtatagccaaggctgtccagtcaatctcacaggcagctcaagctcgt
ccaaccaccaagttgcttgattctgcatcattaccaaaacttgatgcaccagcccaccct
ttccaaagactaagaaaacctctaaaaatccctcaatcattagagattactacagagaag
aatggagaatttactagaaagaagaaaaggccgttacctagcaagaagtggaggaagttg
gcatctcgtgagcaaaggcaggacgaaggatcagatgtcaatacctccagtcatgaggac
aacacagaggatactgaagatgtagaatcttctttcgtggcacttgaaggtggattcaaa
atcccggaaactatctttaacaaactttttgactatcagaaggttggtgtacagtggctg
tgggaacttcactgtcaaagagctggtgggataattggagatgagatgggtcttggtaaa
accatacaggttttgtcttttcttggatcactgcattttagcgatatgtataagccaagc
attatcatttgtccagtcacacttttgcggcaatggaagagggaagctaaaacatggtat
cccagcttccacgtggagatattacatgattcagcacatgattcatcaagtaaaaagaag
caagcggattctgaaagtgactatgaaagcgaagatctgctcgatagtgagactgaagga
aaaacatcttccaggacttccaaaaaatgggatcccgttatagctcgtgttgtaagatca
aattctgggctattgatcaccacttatgaacaactccgtctattgggagaaaagttactt
gacatcgaatggggttatgcagtgttagatgaaggacatcgtattcggaacccaaatgct
gaagttactcttgtatgcaagcagctccagactgttcaccgtatcataatgacaggggcc
ccaattcaaaacaagttgagtgaactgtggtcattgtttgatttcgtctttcctggaaag
ttgggagttctacctgtgtttgaggctgaatttgctgttcccatatctgttgggggttat
gctaatgcaacaccgttgcaagtttccacagcttacagatgtgctgtggtgttgcgggat
ttaatcatgccttacctcctccggcggatgaaagctgatgtcaatgctaatctcccaaag
aaaactgagcatgtcctcttctgtagcctcactaaagagcagcgatctgtttaccgagct
tttcttgctagctctgaggttgaacagatctttgatgggagcaggaactctctgtctgga
attgatgtaatgcgtaaaatttgcaaccatcccgatcttcttgaaagagaacactccagt
agagatccagactacggaaaccctgaacgcagtggaaaaatgaaagttgttgcagaagtg
cttaaggtatggaaggaacaggggcaccgtgttctccttttttctcaaactcaacagatg
cttgatattcttgagagatttcttgttacttgtgagtacaattataggcgaatggatggt
atcactcctgtaaagcagaggatggttttgatagatgaatttaacaatacagatgatatt
ttcatcttcatcttgacaacaaaagttggtggtctggggacaaacttgactggggctaat
agagtaatcatttttgacccagactggaacccatcaactgatatgcaggccagggagcgt
gcttggcgtattggtcagaaaaaagatgttactgtgtatagattgattacccgaggagcc
attgaggagaaggtgtatcatcgacagatttacaagcactttcttaccaacaagatattg
aaaaacccacagcaaagaagatttttcaaagcaagagatatgaaggatctctttacatta
aatgatgatggaaatggggggtctacagaaacatctagtattttcagccaagtatctgaa
gatgtgaacattgttggggctccagatagtcaagagaaaccatcttttcaatcaccagtg
gtaaaggatgattattccaagattggagaggcagacaactcagatcccaggggaaaagcg
ggagatgataacaacaatggggagttagatgaagaaacaagtatcctgcggggtcttttt
gacgctcatgggatccatagtgcgatgaaccatgatgctatcatgaatgctcatgatgaa
gaaaagttgaagctagaggagcaggcatcccaagtagctcagagagctgcagaagcactg
cggcaatcaagaatgcttcgaagtcgagaaagtgtagcagtgccaacctggactggcaaa
tcaggagctgctggagggccatcatctgctaaaaagaaatttggttctactgttaatcct
caattaaccagtaaatcatctgaagaatccttgaatggctatgatgctattaggggaaat
gcttttcctgcaggggcatctgctggaaaagcattgtcttcagccgagttattagctaag
attagggggaatcgagagaaagctgttagtgatggacttgttcatcagtttggtacgcca
gcttcaacctccaacagcagagcaggatctgtaagtaatgggcaccggagtgcatcttct
agttctgtggttcagccagaagtgttggttcgccagatctgtacatttatacaacagaga
ggtggaaaaaccaattcagccagtatcgtagattatttcagggacagggtaccatcaaag
gacctgcccctgttcaagaatctattaaaggaaatagcgattcttgagaaaaaccctagt
ggttctttctgggttctaaagtctgaatatcaggatcagtag
DBGET
integrated database retrieval system
