Solanum verrucosum: 125811545
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Entry
125811545 CDS
T11474
Name
(RefSeq) protein argonaute PNH1-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
sver Solanum verrucosum
Brite
KEGG Orthology (KO) [BR:
sver00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sver03019
]
125811545
03036 Chromosome and associated proteins [BR:
sver03036
]
125811545
Messenger RNA biogenesis [BR:
sver03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
125811545
Chromosome and associated proteins [BR:
sver03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
125811545
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
125811545
microRNA pathway
RISC loading complex
125811545
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoN
ArgoL1
ArgoL2
ArgoMid
Piwi_N
Selenoprotein_S
Motif
Other DBs
NCBI-GeneID:
125811545
NCBI-ProteinID:
XP_049347008
LinkDB
All DBs
Position
Unknown
AA seq
945 aa
AA seq
DB search
MPQWQMKLDLEQKHMVSRTPLQESLNENAQSHSSGERSRMEEVKRNNNAGKRRGRRKGKG
ILVEKMQDMSNNSEVSPACSASSSSERSLVFPRRPGYGQLGTKCLVKANHFIAELSERNL
SQYSVRITPEVRCTRLNKAIMAELVKLHKDADLGKRIPVFDGRRTLYTAGLLPFNSKEFT
VTLGDDDEWIGITKEREFTVTIKFISQANMLQLRELLSGKHVDNPPQALKIIDIVLRELA
SQRYISVGRFFYSPNIKKPQTLGNGLQSWRGFYQSIKPTQMGLSLNIDMSTTAFIEPLPV
VEFVAQVLGKDVSSRPLSDADRIKVKKALRGVKVEVTHRGNIRRKYRISGLTSQPTRELI
FPVDEEKNMKSVIEYFQEVYGFTIQYPHLPCLLVGSQKKVNYLPMEACKILEGQRYTKRL
DEKQITSLLKSSCQRPREQEMDILQTIRQNGYKQDPIAKEFGINIDDKLASVEARVLPAP
WLKYHDAGKEKECHPQLGQWNMLNKKVINGSTVNHWACINFSCNVQENAARGFCHQLAQM
CQISGMEFNCEPMIPVYYARPDQAKKALNYVYNAAANKLGGKELELLIAILPDNNGSLYG
TLKKICETDLGMISQCCLTKHVLKISKQYLSNVSLKINVKMGGRNTVLLDALRWKIPLVS
DIPTIIFGADVTHPESGEDCSPSIAAVVASQDWPEVTKYAGLVCAQPHRQELIQDLYRTW
QDPQRGTMSGGMIRELLLAFKKATGQKPLRIIFYRDGVSDGQFYQVLLYELDAIRKACAS
LEPGYQPPVTFIVVQKRHHTRLLPNNHNDRNHTDRSGNILPGTVVDTKICHPTEFDFYLC
SHAGIQGTSRPAHYHVLWDENNFSADEMQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAY
RARFYVEPDSRDNGSMRSTRATNGSVNVRPLPALKEKVKNVMFYC
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atgcctcaatggcaaatgaaattagaccttgagcaaaagcatatggtttcaagaactcct
ttacaagagtcgttgaatgagaacgcgcaatcccatagtagtggagagcgtagtagaatg
gaagaagtcaagagaaataataatgcagggaagagaagaggtaggaggaaagggaaaggg
atattagtcgaaaaaatgcaggatatgagtaataactctgaggtttcccctgcttgttct
gcttcatcatcatccgaaagaagtcttgtgttccctcgtaggccgggatatggacaatta
ggtaccaagtgtttggttaaagccaaccatttcattgctgaattatcagaaaggaactta
agccagtatagcgtaagaattactcctgaagttaggtgtacaagattgaacaaggctata
atggctgagttggttaaacttcataaagacgcggacttgggaaaaagaattccggttttt
gatggaagaagaacgctttacacagcggggttactcccttttaactcgaaagagttcact
gtaactcttggtgatgatgatgaatggataggaatcacaaaggagcgtgaatttactgtc
acgatcaagttcatctcacaagccaacatgcttcaattacgcgaacttctttcagggaaa
cacgttgataatcctccacaagcacttaaaatcatcgatattgtgctaagggaacttgct
tctcaaaggtacatatccgttgggagatttttctattctccgaatattaaaaagccacag
acactaggtaatggtttacagtcttggaggggtttctaccagagcataaaacctactcag
atgggattgtctctcaatattgatatgtcaacaacagcattcatcgaaccactcccggtt
gttgaatttgttgctcaagttttgggaaaagatgtaagttcaaggccattgtccgatgca
gatcgaataaaggttaaaaaagctcttcgaggtgttaaagttgaagtgacacatagggga
aatattcgaaggaaataccgaatttctggattgacatcacaaccaacaagggagctaatt
tttcctgtcgatgaggagaagaacatgaaatcagtcatcgagtatttccaggaggtgtat
ggattcaccattcagtatcctcatctaccttgtcttctcgtgggaagccaaaagaaagtg
aattacttaccgatggaggcttgtaagatactcgagggacagagatacaccaaaaggttg
gatgagaagcagataacttcactgttgaaatcgtcatgccaaagaccacgagaacaagaa
atggacattttgcagaccattcgccagaacggatacaagcaagaccctattgcgaaggag
tttggcatcaatattgacgataagcttgcatcagtggaagctcgagttctccctgcacca
tggttaaagtaccatgatgcagggaaggaaaaggaatgtcatccacagctaggccagtgg
aacatgttaaataagaaagtaattaatggaagtactgtaaaccactgggcttgcatcaac
ttttcgtgtaacgtccaagaaaatgcagcccgtggcttttgtcatcagcttgcccaaatg
tgccaaatctctggaatggaatttaattgtgagcccatgataccggtttattatgcaaga
ccagatcaggcaaagaaggcattgaattatgtatacaatgctgctgctaacaaacttgga
ggaaaagaattggagttactaattgccattctacctgacaacaatggttctttgtatggt
actctgaagaaaatttgtgagacggatttgggtatgatttctcagtgttgtcttacaaag
catgtgttaaaaatcagcaagcaatatctgtcaaatgtatcactgaaaataaatgtgaag
atgggaggaaggaacactgtacttttagatgctttgagatggaaaattcctctcgttagt
gatatcccaacgattatatttggtgctgatgtgactcatccggaatcaggagaagactgt
agcccatcgattgctgctgttgtagcatcacaagattggccagaagttactaaatacgcc
ggtttagtatgtgctcaacctcatagacaagaactcattcaagatctttaccggacttgg
caagatcctcaacgaggaacaatgtctggagggatgattagagaacttctattggcgttc
aagaaagccacaggacagaaaccactgagaataatattctacagggatggtgtaagtgac
ggtcagttttatcaggttctactttatgaactcgatgcaattcgtaaggcttgtgcatct
cttgaaccaggttaccaacctccagtaaccttcatagtcgtccaaaaacgtcaccacaca
cgtcttttgccaaataaccacaacgacagaaatcacactgacaggagtggaaacatccta
cctggtactgtggtggatacaaaaatatgtcatccaactgaattcgatttttacttatgc
agtcatgctggaattcagggaactagtcgtcctgcacattatcacgttctctgggatgaa
aataatttctccgcggatgaaatgcagtctttgacaaacaacctttgttatacatatgct
cgatgcactcgttctgtttcagtagttcctcctgcatattatgctcatttggctgcctat
agagcgcgtttctacgtagaacctgactcacgtgacaacggttcaatgcgtagcacacgt
gcaacgaacggttctgtcaacgtccggccactaccagcattgaaagagaaggtgaaaaat
gtgatgttctattgctag
DBGET
integrated database retrieval system
