Solanum verrucosum: 125811665
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Entry
125811665 CDS
T11474
Name
(RefSeq) probable polygalacturonase At1g80170
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
sver Solanum verrucosum
Pathway
sver00040
Pentose and glucuronate interconversions
sver01100
Metabolic pathways
Module
sver_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
sver00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
125811665
Enzymes [BR:
sver01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
125811665
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta-prop_SCAP
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML_2
Motif
Other DBs
NCBI-GeneID:
125811665
NCBI-ProteinID:
XP_049347147
LinkDB
All DBs
Position
Unknown
AA seq
416 aa
AA seq
DB search
MCSSISSYTMKILVLLFILIGLTNSRIYSASIFGYPGSFNVLDYGAAADGITDDSQALLN
TWNDACSSSAGSPQVIIPPNMIFLLSPVTLTGPCNSVNIYFVISGSLVSPSSPSVWTGQD
SSQWLAFRNVSGLVVDGSGTIDGQGKGWWDQSCRYHPEMEGCTRLAPTALKFILCSQSSI
SNMYFANSAQTHILIERCNGFNVNNVMIQSPGNSPNTDGIHIQSSQNVAITNSKISSGDD
CISIGDYSSNIQIYNIQCGPGHGISIGSLGKGGHSAQVENIHVNTVFFYGTTNGARIKTW
QVGRGYVRDVTFENLQFNSVKNPIIIDQNYCDVRGACKEMGTGVKISNVVYQNIYGTSST
DIAINLNCSMSVPCTDITMQLIQLTPATPGRQVKAYCRNANGQEYGIEPGPCLSGV
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgtgttcctctatctcttcatatactatgaaaatattggttctcttgttcattttaatt
ggcttgacaaattcaagaatatatagtgcaagtatatttggatatccgggaagttttaat
gtcctggattatggagctgctgctgatggcattactgatgattctcaagcattacttaat
acttggaatgatgcatgttcatcctcagctggatctcctcaagtgattattcctccaaat
atgatatttttacttagccctgtgacactcacaggcccctgcaattcagtgaacatctat
tttgtgatatccggtagtcttgtttcaccgagctcacctagtgtatggaccgggcaagac
tcgagtcaatggctagctttcagaaacgttagcggtctagttgttgatggctcaggaacc
attgatggtcaaggaaaaggatggtgggatcaatcatgtagataccaccctgaaatggaa
ggatgcacaagattagctccaactgcgttgaagttcattctttgcagtcagagttccatc
agtaacatgtactttgcaaacagtgcgcaaactcatatacttatagagagatgcaatggt
ttcaacgtgaacaatgtaatgattcaatctccaggaaatagtccaaatactgatggaatt
cacattcaatcttctcaaaatgtggccattacaaattctaaaattagcagtggagatgat
tgcatttcaattggagattactcttctaatatccaaatatacaacattcaatgtggacca
ggtcatggtataagtattggaagcttaggaaaaggtggtcattctgctcaagtagagaac
attcatgtgaacactgttttcttctatggaactacaaacggagctcgtatcaagacatgg
caggttggcagaggctatgtccgagatgtcacgtttgagaatcttcaattcaactctgtc
aagaaccccatcataattgaccagaattactgtgatgttcgaggggcttgcaaggaaatg
ggaactggagtgaaaatcagcaatgttgtttaccagaacatatacggaacgtcgagcacg
gatatcgcgataaatttaaactgcagcatgtctgtgccatgtacagatataacaatgcag
cttatacaactaacaccagcaacaccaggaaggcaagttaaagcttattgtaggaatgct
aatggccaagaatatggaatcgaacccggtccttgtctctctggagtttga
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