Solanum verrucosum: 125812581
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Entry
125812581 CDS
T11474
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC1A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
sver Solanum verrucosum
Brite
KEGG Orthology (KO) [BR:
sver00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sver04131
]
125812581
04121 Ubiquitin system [BR:
sver04121
]
125812581
Enzymes [BR:
sver01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125812581
Membrane trafficking [BR:
sver04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
125812581
Ubiquitin system [BR:
sver04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125812581
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-RING_16
DUF1272
VPS18_RING_C
HypA
Prok-RING_1
Motif
Other DBs
NCBI-GeneID:
125812581
NCBI-ProteinID:
XP_049348031
LinkDB
All DBs
Position
Unknown
AA seq
318 aa
AA seq
DB search
MSSGSYTHWCHRCRQPIRPRGTTCLCPNCGGGFVEELDDMVGTRSNIEADPHFGLMDPFP
DPRFGIMDALAAFMRQRMAGRNPNFDIRTRSGVVPGSGRGFGSGPWLIFHGQTPVSMTEN
DAFEYFFSNGSPGMGHRRPNFDDLMGPGLQQLIEQLSMNDRQGPPPAPRSAIDALPTLRI
TQRHLNVDSQCSVCQDNFELGSEARQMPCKHLYHSDCIVPWLVRHNSCPVCRLELPSRAS
ASAPPNWSSRTGNVSSGSNSSSRENSSQNQGRRNPFSFLWPFRSSNQNTSNFTERGGGSS
STTPYEENNEANYPAWRF
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtgggagctatacacactggtgccacagatgcaggcagccaattcggcctcga
ggaactacttgtctttgcccaaattgtggtggaggtttcgttgaagagctcgatgacatg
gtaggtactagatctaatattgaggctgatcctcattttggattgatggatcctttcccg
gacccaagatttggtataatggatgcccttgctgcattcatgaggcagagaatggcagga
agaaacccaaactttgacattaggacaagatccggtgttgttcctggaagtggcaggggt
tttggttctggtccatggttgatatttcatggccaaactcctgttagtatgaccgaaaac
gatgcatttgagtactttttctccaatggaagcccgggaatggggcatcggcgacctaat
tttgatgatttgatggggcctggtctgcaacagttaattgagcagctcagtatgaatgac
cggcaggggcctccgccggcacctcgttctgcaatagatgctttgcctactctcagaatc
actcaaaggcacctcaacgttgattctcagtgctcagtttgtcaagataactttgaattg
ggttctgaagcaaggcaaatgccatgtaagcatctttaccattccgattgtatcgtacca
tggttggttaggcacaactcgtgccctgtttgccgtcttgagctgccttcacgagcttct
gcgagtgccccacccaattggagttccagaactggaaacgttagcagtggcagcaacagt
agtagcagggagaatagcagtcagaaccaagggaggaggaatcctttttcattcttgtgg
ccttttcgctcgtccaaccaaaacactagcaacttcactgagaggggaggaggaagtagc
tcaacaacaccctatgaagagaacaatgaagcaaattaccctgcgtggcgcttttaa
DBGET
integrated database retrieval system
