Solanum verrucosum: 125812954
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Entry
125812954 CDS
T11474
Name
(RefSeq) serine/arginine-rich-splicing factor SR34-like
KO
K12890
serine/arginine-rich splicing factor 1
Organism
sver Solanum verrucosum
Pathway
sver03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sver00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125812954
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sver03041
]
125812954
Spliceosome [BR:
sver03041
]
Common components
Common spliceosomal components
SR proteins
125812954
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
RRM_7
RRM_YTH1
Motif
Other DBs
NCBI-GeneID:
125812954
NCBI-ProteinID:
XP_049348390
LinkDB
All DBs
Position
Unknown
AA seq
367 aa
AA seq
DB search
MSRSSRTIYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDA
IRGRDGYDFDGHRLRVELAHGGRGNSSSNDRYNSGNNSGHNGGGRNNHKFGAPKRTEYRV
LVTGLPHSASWQDLKDHMRRAGDVCFSQVFREGSGTTGIVDYTNYDDMKYAIKKLDESEF
RNAFSRSTIRVKEHDSRSRSRSRSYSRGKSGSRSHSYSRSRSRSKSPKAKSSKRTRSRSR
SVSSQPRSGLKGRSLSRSPSRSRSPVPSRPKRVSKSPKRASKSPKPRDSRRSQSLSKSPK
PHDSRRSKSPSKSPKLRDSRRSKSMSKSPEPRNSRRSPSRSKSPKPRNSRRSPSRSRSRS
RSGSLSR
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgttcaagtaggacgatttatgttggtaatcttcctggtgatattcgtgagcga
gaagtggaggatctgttctacaagtatggcccgatagcacatattgatctgaaaattcca
ccaagacccccgggttatgcttttgttgagtttgaagaggcacgcgatgctgaggatgct
attcgtgggcgcgatggctatgattttgatgggcatcgtttgagggttgaacttgcacat
ggtgggcgtggtaactcatcgtcaaatgatcgttataatagtggcaataatagtggccat
aatggtggtggtcggaataatcacaaatttggagcacccaaacgtactgagtatcgcgtt
ttagttaccggattgccccattcagcatcctggcaggatctcaaggatcatatgcgtcga
gctggggatgtttgtttctcacaagttttccgtgaggggagtgggaccactgggattgtg
gattataccaactatgacgacatgaaatatgctataaaaaaacttgatgaatctgagttt
cggaatgctttttcccgttcaacaattcgggtgaaagaacatgattctagaagccgcagc
cgcagccgttcttactcgagaggaaagagtggtagccgtagccacagttacagtcgtagc
cggagcagaagcaaatctcctaaagctaaatcgtcaaagcgtacaagatctcgttctaga
tccgtctcttctcagccccgttctgggttaaaaggacgctctttgtcaagatctccatca
agatccagatccccagtaccatctcgccccaaacgtgtgagtaaaagcccaaaacgtgca
agcaaaagcccaaagcctcgcgactccaggagaagtcagagcttgagtaaaagcccaaaa
cctcatgattccaggagaagcaagagtccaagcaagagcccaaaactgcgtgattccagg
agaagcaagagcatgagtaaaagcccagagccacgcaattccaggaggagcccgagcagg
agcaaaagccccaaaccacgcaattccaggagaagccctagcaggagccgcagccggagt
cgcagtgggagtttgtcgaggtga
DBGET
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