Solanum verrucosum: 125813684
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Entry
125813684 CDS
T11474
Name
(RefSeq) uncharacterized protein LOC125813684
KO
K14555
U3 small nucleolar RNA-associated protein 13
Organism
sver Solanum verrucosum
Pathway
sver03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sver00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
125813684
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sver03009
]
125813684
Ribosome biogenesis [BR:
sver03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
125813684
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
WD40_Prp19
Beta-prop_THOC3
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
WD40_WDHD1_1st
EIF3I
WD40_Gbeta
WD40_MABP1-WDR62_2nd
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Utp13
Beta-prop_WDR36-Utp21_2nd
WDR55
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_SCAP
Beta-prop_DCAF4
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_EIPR1
Beta-prop_Aladin
Beta-prop_WDR41
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_Nup120_160
Beta-prop_SPT8
ANAPC4_WD40
PEP5_VPS11_N
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_NWD2_C
Beta-prop_VPS8
WD_LRWD1
Beta-prop_DCAF12
Beta-prop_ACSF4
eIF2A
Beta-prop_WDR75_2nd
Nucleoporin_N
Beta-prop_Vps41
Beta-prop_NUP159_NUP214
WD40_like
Nbas_N
Cytochrom_D1
WDR54
SGL
UTP15_C
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
125813684
NCBI-ProteinID:
XP_049349093
LinkDB
All DBs
Position
Unknown
AA seq
871 aa
AA seq
DB search
MASVSLKKSYKCVQSLQQFYTGGPYAVASDESFLVCACDEKIKIVDLSNASIKSTIEGDS
EAVTALALSPNNNILFSASHSRQIRVWDLSTLECIRSWKGHEGPVMGMASDASGGLLVTA
GADRKVLVWDVDGGFCTHYFKGHKGVVTSIMFHPDPNRLLLFSGGDDGSVRVWDLTGKKC
LSTLEKHQSAITSMAISEDGWTLLSAGRDKVVNLWNLHDYGCMTTIPMFESLEAVCIIGP
ESPFAASLSSLTYPQTKKRSDVPSINFITVGERGLVRIWSADRALCLFEQKSSDIAVSSG
DEESKRGFISALLMPASQELLCVTADQQFFLYYPEESEGSLNLVLRKRFVGYNEEIVDMK
FLGDEEQFLAVSTSVEQVRVYDLTSMSCSYVLAGHTDVILCLDTCVSSSGRTLIVTGSKD
NTVRLWDCQSKACVGVGIGHMGAVGAVVFSKKQRNFFVSGSSDRTLKVWNMDSVSDNNEE
VLTLKAKAVVAAHDKDINCLAVAPNDSLVCSGSQDRTACIWRIPDLVSVVALKGHKRGIW
SVEFSPVDQCVMTASGDKTIKIWAISDGTCLKTFEGHQSSVLRASFLTHGTQIVSCGADC
MVKLWTVKTNECIATYDQHEEKIWALAVGKKTEMLATGGGDAVINLWHDSTALDKEEAFR
KEEEGVLRGQELENALIDADYTRAIQIAFELRRPHKLLELFRELCRKNDMDDQIGKAIKA
LGKEELQLLLEYIREWNTKPKFCQIAQYVLSRAYSILPATEIVEVPGFKELLNGLIPYTQ
RHFNRLDRLVRSLCILQYTSAAMSVIQPEGNEGKLEGKDAKLPNAADIDELSDITSVEEE
QHHNELKGKNSSKKRKNKSRHSASKKVKGGD
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcagtatcattgaagaagagttacaagtgtgtgcagtctttgcagcagttttat
actggtgggccttatgcggttgcttcagatgaatcgtttcttgtatgcgcgtgtgatgaa
aagataaagattgttgatttatcaaacgcttcgataaaatctacaatagagggtgattct
gaagcagtgacagctcttgctcttagccctaataataatatcctcttttctgctagtcat
agccgacagattagagtttgggacctttccacgctggaatgcatacgctcctggaagggg
catgaaggacctgtaatgggcatggctagcgatgcatcaggtggattgctggtgacagct
ggggctgacaggaaagttcttgtgtgggatgtcgatggaggcttctgcactcattatttc
aaaggtcacaagggggttgtcaccagcattatgtttcatcctgacccgaataggctgctg
ctgttttctggtggtgatgatggttctgtaagggtctgggatctgacaggtaagaaatgt
ctgtcaacgctagagaaacatcaatcagctatcacttccatggcaatatctgaagacgga
tggactttgcttagcgcagggagagacaaggttgtaaatttgtggaacttacatgattat
ggctgcatgaccaccataccaatgtttgagtcacttgaagcagtgtgtataattggtcca
gaatctccttttgctgcatccctgtcttcgttgacatatccacagacaaagaagagaagt
gatgtaccatcaattaatttcatcactgttggcgagcgaggattggttcggatatggagt
gctgatagggcactgtgcctttttgagcagaaatcctccgatattgctgtaagctcgggc
gatgaagaatcaaagagaggctttatttctgctttgcttatgcctgcaagtcaggagtta
ctttgtgttacagctgaccagcagttttttctttattatccggaggaatctgaaggtagt
ctgaacctagttcttaggaagaggtttgttggatacaacgaagagattgtagatatgaaa
tttttgggtgacgaggaacagttccttgctgtttcgacaagcgtagagcaggtgcgagtg
tatgatcttacatcaatgtcgtgctcttatgtcttggctgggcatactgatgttattttg
tgccttgatacctgtgtatcaagctctggaagaacgcttattgtaacggggagcaaggac
aacactgttaggttatgggattgccagagcaaagcttgtgttggagttggcataggtcac
atgggagctgttggcgctgttgttttttcaaagaaacagagaaatttctttgtgagtggt
agcagtgaccgtactctaaaggtatggaatatggattctgtctctgacaacaatgaagaa
gttctaacattgaaagcaaaagcagttgtagcagcgcatgacaaagatattaactgtttg
gcggtagcaccaaatgacagtcttgtttgcagtgggtctcaggatcgtactgcttgcata
tggagaattccagacctagtatcagtggttgcactgaaagggcataaaagggggatatgg
tctgtggagttttcaccagttgatcaatgtgtgatgacagcttctggagataagacgata
aaaatttgggcaatatctgatggaacatgtttgaaaacatttgaagggcatcaatctagt
gtgttaagagcgtcatttctcacccatggcacccagattgtttcttgcggtgctgattgt
atggtgaagttgtggacggttaagaccaatgagtgtattgcaacttatgaccaacatgag
gaaaagatttgggccctggctgttggtaagaaaacagaaatgcttgcgactggcggtggt
gatgcagtgatcaatttgtggcatgactcaacagctttagataaagaggaagcttttcgt
aaagaagaggaaggcgttctaaggggtcaagagctagaaaatgctttaatagatgctgac
tacacaagagcaattcagattgcatttgagcttcgcagaccacataaacttctagagtta
tttcgtgaactctgcaggaagaacgatatggatgatcagataggaaaagctataaaggct
cttggtaaggaagagcttcagttgcttttggaatatatccgggaatggaacacgaagcca
aagttttgtcaaattgcgcaatatgttctttcccgggcatacagtatcctcccagctacc
gagattgttgaggtaccgggatttaaagaacttcttaatggtcttattccttacactcag
aggcatttcaatagattagatagattagtgagaagcctatgcattctccagtatacttca
gctgcaatgtcagtcattcagccagaaggtaatgaagggaaattggagggcaaggatgcc
aaacttcctaatgctgcagatatcgacgagttaagtgatattacctcagtggaggaagag
cagcaccataacgaattgaaaggaaaaaattcttcaaaaaagcgaaaaaacaaatcaaga
cattctgctagtaagaaagtgaaggggggtgactaa
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