Solanum verrucosum: 125814216
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Entry
125814216 CDS
T11474
Name
(RefSeq) cysteine--tRNA ligase, chloroplastic/mitochondrial isoform X1
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
sver Solanum verrucosum
Pathway
sver00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sver00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
125814216
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sver01007
]
125814216
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sver03016
]
125814216
Enzymes [BR:
sver01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
125814216
Amino acid related enzymes [BR:
sver01007
]
Aminoacyl-tRNA synthetase
Class I (G)
125814216
Transfer RNA biogenesis [BR:
sver03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
125814216
Prokaryotic type
125814216
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1e
tRNA-synt_1g
tRNA-synt_1
CysS_C
tRNA-synt_1f
DALR_2
DUF6825
DUF2067
Motif
Other DBs
NCBI-GeneID:
125814216
NCBI-ProteinID:
XP_049349631
LinkDB
All DBs
Position
Unknown
AA seq
568 aa
AA seq
DB search
MTTLLKCYKPLLPFQSRKMHIAAAVNSFRYYSRSRLRARCLSTIGNSKSTVDIKVVNGEG
TETELRKQQLWLHNTMSKQKELFIPKVPGKVGMYVCGVTAYDLSHIGHARVYVSFDVLYR
YLNYLGYEVKYVRNFTDVDDKIIARANELGEDPIKLSRRFCEEFHQDMTYLHCLPPSVEP
RVSDHMPQIIDMIQQILDNGCAYRINGDVYFSVDKFPEYGTLSGRKLEDNRAGERVAVDT
RKKHPADFALWKTAKAGEPFWESPWGPGRPGWHIECSAMSAAYLGYTFDIHGGGMDLVFP
HHENEIAQSCAACRESNITYWIHNGFVNIDSQKMSKSLGNFFTIRQVIDLYHPLALRLFL
IGTHYRSPINYTIVQIESASDRLFYIYQALYDCQILSTQHDEASLKDSIPAETANCINKF
QDEVLSSISDDLHTPVALAAMSDPLKLINDLLHTRKGKKQALRIESIAALENTIRNVLAI
LGLVPASYAEALHELREKALKRAKLTDDQVHQKIVERDTARKNKEYDRSDVIRKDLAAVG
IALMDSPEGTTWRPAFPLALEEEQVTVP
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgcttttaaaatgctacaagcctttgcttcccttccaaagccgtaaaatgcac
attgccgccgccgtcaatagtttcaggtactattcgagaagccgacttagggctaggtgc
ctgagtacaatcggaaattcaaagtcaacggtggatataaaagtggttaacggtgaagga
actgagactgaattgaggaagcagcaactatggttacacaatacaatgagcaaacaaaag
gaattatttataccaaaagtgccgggaaaagttggaatgtacgtctgtggtgtaacggcg
tatgatctcagccatatcggccatgctcgcgtttatgtttcctttgatgttctatataga
tacctaaattatttgggatatgaagtcaaatatgttcgcaactttactgatgttgatgac
aagattattgctagagcaaatgagctgggtgaggatccaatcaaattaagcagacgcttc
tgcgaagagtttcaccaagacatgacttatcttcactgtcttcctccttcagtggaacct
cgtgtgtctgatcacatgcctcagataatcgatatgattcagcagattctcgataatggt
tgtgcttacagaatcaatggtgatgtctacttttctgtagacaaattcccagaatatgga
acattatctggccgaaaattggaagataatagggcaggagaacgtgtagcagtagacaca
aggaagaagcatccagctgattttgccttgtggaaaactgctaaggcgggagaacctttc
tgggagagtccctggggtccaggaagacctggatggcatattgagtgcagtgccatgagt
gctgcatacttgggatatactttcgacattcatggtggggggatggatcttgtgtttcct
catcatgaaaatgaaattgcccagagctgtgctgcttgtagggagagcaacataacttat
tggatacacaatggatttgtcaacattgactctcagaaaatgtcaaagtcactaggaaac
tttttcacaattcggcaggtgattgatctttatcacccattggcacttaggcttttctta
attgggacacattatagatctccaatcaattacacgattgtacagattgagagtgcatct
gaccgccttttttacatatatcaggcattatatgattgtcaaattctttccacccagcat
gatgaggcaagtttgaaggattctattcctgcagaaactgctaattgtataaataaattc
caagatgaagttttatcttcaatatcagatgatcttcacactcctgttgcactggcagca
atgtcggatccactgaaattgatcaatgatctcttgcatacacgaaagggtaaaaagcaa
gcattgcggatagagtcaattgcggctttagagaatactataagaaatgttctagcaatt
ctggggcttgtgccagccagttacgcagaggctttacatgaattgagggagaaagctttg
aagcgtgcaaagttgactgacgatcaagttcaccagaaaatcgtggagagggatacagca
cgtaaaaataaagaatatgatagatcagatgtaattcgaaaagatttggctgctgtaggt
attgctttgatggatagccctgaaggcactacatggagaccagcttttcctcttgcattg
gaagaagagcaggttacagtcccttga
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