Solanum verrucosum: 125814263
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Entry
125814263 CDS
T11474
Name
(RefSeq) protein ALTERED SEED GERMINATION 2
KO
K11807
WD and tetratricopeptide repeats protein 1
Organism
sver
Solanum verrucosum
Brite
KEGG Orthology (KO) [BR:
sver00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sver04121
]
125814263
Ubiquitin system [BR:
sver04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
125814263
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
WD40
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_2nd
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
WD40_Gbeta
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_EIPR1
ANAPC4_WD40
NBCH_WD40
Beta-prop_WDR36-Utp21_2nd
Beta-prop_SCAP
Beta-prop_Aladin
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
Beta-prop_WDR41
TRM82_WD
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF12
Beta-prop_IFT140_1st
Beta-prop_VPS8
ANAPC3
TPR_8
TPR_19
Motif
Other DBs
NCBI-GeneID:
125814263
NCBI-ProteinID:
XP_049349688
LinkDB
All DBs
Position
Unknown
AA seq
758 aa
AA seq
DB search
MESLCFHDGNITNLINKRYLNVRHDSVHELQMHSSLVKRMALERELDGHQGCVNAIAWNS
KGSLLISGSDDTSMNIWSYSGHKRLHSIETGHSANIFCTKFIPETSDELVVSGAGDAEVR
LFHLSHQKGRGEDNTVTPAALFQCHTRRVKKLAVEVGNPHVVWSASEDGTVRQHDLREGA
SCPPAGSSRQECRNILLDLRCGARKSLADPPKQLFALKSCDISSMRPHLLIVGGSDAFAR
LYDRRMLPPLSSSQKKLPPPPCVSYFCPMHLSDRGRSNLHMTHVAFSPTGEEVLLSYSGE
HVYLMDVNAAHGSSISYTSGDVSNLMNFAPLVNGIELQSSVSGIFLNGSSSKRIPAAKLE
KCKRLMQMALKSLKEDSNFYYGIEACNEVLDGCRDEIGPLLSFECLCTRAAILLKRKWKN
DAHMAIRDCHRARKLNSSSFRPLILIADALSQLGKHKEALEFAIGAQSLAPSDSEVALKV
ESIKEKIAAAEADKTNKANGGESRSDPRAGRLLSLSDILYRSDANSDASQDGPRSERDDS
DDDDELELAFETSMSGDEGRDVDPSVLHGSLNLRIHRRGDSTGEAGWENGSCGSPASSQK
EKTAYQPETVIDMKQRYVGHCNVSTDIKQASFLGERGEYIASGSDDGRWFIWEKRTGRLI
KMLHGDEAVVNCVQCHPYDCVVATSGIDNTIKIWTPTPSLVADGAAGPETSNVLEAMESN
QRRLCRTREAVLPFEFLERFRMHEFTEGSLHPFECTQS
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atggaatcactctgttttcacgacggcaacatcactaacttgatcaacaaacgctacctc
aacgttcgccatgactctgttcacgaattgcaaatgcactcctctttggtgaaaagaatg
gctttagaaagagaactagatgggcatcagggttgcgtgaatgcgatagcttggaactca
aaaggctcccttttgatatctggatcagatgatacaagcatgaatatctggagttactca
ggccacaaacgtttgcattccattgagactggtcacagtgccaacatattctgcacaaaa
tttattccagaaacttcggatgagctagttgtttctggagcaggagatgctgaagttcgt
ctttttcatttgtctcatcaaaagggaagaggtgaagacaataccgtgactccagcagca
ctatttcagtgtcataccaggagggtcaaaaaattagctgttgaagttgggaatcctcat
gtagtatggagtgctagtgaagatgggactgtgagacagcatgatcttcgggagggtgcg
tcttgtcccccagctggttcttctcgtcaagaatgccgtaatatacttcttgacttacgc
tgtggagctaggaaatcattagctgatcctcctaaacagttgtttgctctgaagtcgtgt
gatattagctccatgaggcctcatttgcttattgttggtggaagtgatgcttttgctcgg
ttgtatgataggagaatgctacctccattatcctcgagtcagaaaaagcttccacctcca
ccttgtgtcagctacttctgcccaatgcatctttctgatcgtggacgttccaacttgcat
atgactcatgtcgcatttagtcccacgggtgaagaggttttgcttagctatagtggagaa
catgtatacttgatggatgtgaatgctgcacatggaagttctatctcatatacctctgga
gatgtgtcaaacctgatgaattttgctcccttggtcaatggaatcgaattacaatcatca
gttagtggaatcttcttaaatggttcttcatcaaaaagaattccagctgccaagctagaa
aaatgcaaaagattgatgcagatggcactaaagtctttgaaagaggactccaacttttat
tatgggatagaagcttgtaatgaagtcttagacggttgcagggatgagattggtcccctt
ctatccttcgaatgcttatgcactcgtgcagcaatattgctgaagaggaagtggaaaaat
gatgcacatatggctataagagactgtcatagagctagaaagcttaattcatcctccttt
aggcctcttattttgattgctgatgctctttcacagttaggtaaacataaagaagctttg
gagtttgctattggtgcacaatccttggctccatctgattctgaagttgcattaaaggtg
gaaagtataaaagaaaaaattgctgcagctgaagcagacaaaacaaataaggcaaatggt
ggagaatctaggtctgatccacgggcaggaagattattatccctaagtgacatactgtat
cgttcagacgcaaacagtgatgcatcgcaagatggtcccaggtctgaaagagatgattct
gatgatgatgatgaattagaattggcttttgaaacatcaatgtctggtgatgaaggacga
gatgttgatcctagtgtccttcatggaagtttgaacttgagaatccacaggagaggtgat
tccactggggaggctggatgggaaaatggttcatgtggttcgccagcctctagtcaaaaa
gagaaaacagcttaccagcctgaaacagtgatagatatgaagcaaagatatgttggtcat
tgcaacgtcagcactgacatcaaacaagcgagctttcttggtgaacgaggtgaatatatt
gctagtggaagtgatgatggtagatggtttatctgggagaaacgaactggtagattgata
aaaatgcttcatggagatgaagctgttgtaaattgtgtacagtgccacccatatgattgc
gttgtggctaccagtggaattgataacaccattaagatttggactccgaccccttccctt
gtggctgatggagctgcaggaccagagacttccaatgtgttggaagcaatggaaagcaat
caacgcagattgtgccgcactcgtgaagctgtcctgccttttgagtttttggagcgattt
aggatgcatgagtttacagaaggcagcttacatccatttgaatgcacacaaagctga
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