Solanum verrucosum: 125814312
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Entry
125814312 CDS
T11474
Name
(RefSeq) uncharacterized protein LOC125814312
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
sver Solanum verrucosum
Pathway
sver03013
Nucleocytoplasmic transport
sver03015
mRNA surveillance pathway
sver03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sver00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125814312
09122 Translation
03013 Nucleocytoplasmic transport
125814312
03015 mRNA surveillance pathway
125814312
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sver03019
]
125814312
03041 Spliceosome [BR:
sver03041
]
125814312
Messenger RNA biogenesis [BR:
sver03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
125814312
Spliceosome [BR:
sver03041
]
Complex C
Other components
EJC/TREX
125814312
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RSB_motif
SAP
Phi812_weld_lid
Motif
Other DBs
NCBI-GeneID:
125814312
NCBI-ProteinID:
XP_049349741
LinkDB
All DBs
Position
Unknown
AA seq
874 aa
AA seq
DB search
MSDYPVLDNRPINKWKVAELREELKRRNLTTKGLKDDLVRRLNEAICIEMEAAAVKASKD
DGRDIDPASGLEDTEPEPDPVKLVDDVLEHPQIEVTNGSDQITDATCGLDDAQPNSNPDI
LVDNVQKQYQDEFNSIGSDVARASTKICFGGIDQNKVLDEVATGGNDDVLKHHQNEVNEI
DGDVASASTKNSLVEIDQNKVLDEVATGDTTAGESEHLGAPVGSTSVINEIASTDQFGED
KLDKEHKVIDSSQDNYVVDGVSEVRDGSIPVGSTREDVEDMKISSYEGVLEDNLGRQEND
VEVTPVTSKEALKNHSIKLDNEGLKLSDMDAEPDMSNPATQVYEVNPNLGSQVKSDSFST
DTLPINENKDLNDNLNADNVKLETEVVRQEMELQSSSKDLSGVGSSHPLDGQMPHEMQGL
VGETDDDKSSDVKFSMKNDNADQVSVDVSKVEHDFESKTPNNSEQQPDIQFENARTLGDV
EEPSLSPMKIEASAEDTHGLAASGDDRKDFSKIADVVDGENMEKINLDQSSADDSMEEDV
VDTKHVDFDHISKKENDKTEEFITGMTEEPKVRPIGSSDAMQLDIPSEKVASPQETKDKS
LALSEKRKFQDEAGGGSKEPAKRQRRWNTEKTAEPQNSSIALTKKVVQPTPIKPILGRTN
STVGGDSPKERFVPKSSKTATTSLKIENFLRPFTLKAVQELLARTGEVCCFWMDQIKTHC
YVTYSSVEEATETRNAVYNLQWPPNGGRLLVADFVDPQQVQTKIEGREPASPLKVTSPAV
PASSSVQTPPAQQQGRKQQAELEHSLTRQPPPAPPSAPPTKEMLPSPVADKNDPPIVTLD
DLFRKTKATPRIYYLPLTDEEVAKKLAIRGNAKP
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atgtcggactaccctgtgcttgataatcgtccaattaataaatggaaagtagcagaatta
agggaagagcttaagaggaggaacttaacgacaaaaggtttgaaggatgatctggttagg
cgattaaatgaagctatctgcatagaaatggaagctgctgcagttaaagcgagtaaggat
gatggtcgtgacattgatcctgccagtggtcttgaagatactgaacccgagcctgatcct
gttaaattggttgatgatgttctggagcatccccaaattgaagttactaatggttctgat
cagattactgatgctacatgtggtcttgatgatgctcaaccaaatagtaatcctgatata
ttggttgataacgttcagaagcaataccaagatgaatttaacagtattggcagtgatgtt
gctagggccagcaccaagatttgttttggtggaatagaccagaacaaagtcttggatgag
gttgcaactggaggtaatgatgatgttctgaagcatcaccaaaatgaagttaacgaaatt
gatggtgatgttgccagtgccagcaccaagaattctcttgttgaaattgaccagaataaa
gtcttggatgaggttgcaactggagataccactgctggagaatcagaacatttgggggca
cctgttggtagcactagtgttataaatgagattgcatctactgatcaatttggtgaagac
aaacttgataaggaacacaaggttattgattcttctcaggataattatgttgttgatggg
gtatctgaagtccgggatggttctattccagtcggtagtactagagaggatgttgaggat
atgaaaatttcatcttatgagggagtgcttgaggacaaccttgggagacaagaaaatgat
gtggaggtaaccccagtaacatcaaaggaagccttgaaaaaccacagcattaagttggat
aatgagggtctgaaactctcagacatggatgctgagccagatatgtccaatccagccact
caggtatatgaggtcaaccctaatttagggtctcaagtaaaatctgactcattttctact
gatactttgcccattaatgaaaataaagatttaaatgataatttgaatgctgataatgtc
aaattagaaactgaagttgttaggcaagagatggagctgcagtcatccagcaaagaccta
tcaggtgttggtagctctcatccattggatggtcagatgccacatgagatgcagggtctt
gttggagaaactgatgatgacaaatcttcagatgtgaaatttagcatgaaaaatgacaat
gcagatcaggtttctgttgacgtttccaaggtagagcatgatttcgagagtaagactcca
aataatagtgagcaacaacccgatatacagtttgaaaatgctagaactttaggtgatgtt
gaagagcctagtttgtcacccatgaaaattgaggcatctgcggaagatacacatggtctt
gctgcttctggtgatgatagaaaagattttagcaagatagccgatgtagtggatggtgag
aatatggaaaagataaacttggatcagtcttcagctgatgattccatggaggaggatgta
gtagatacaaagcatgtggattttgatcatatttctaagaaggagaatgacaagactgaa
gagtttattacgggaatgacagaagagcccaaagttcgaccaattggttcttctgatgca
atgcagctagacattccttctgagaaggttgcgtctcctcaagaaactaaagataagtct
cttgctttgtcagagaagagaaagtttcaagatgaagcaggaggtgggagtaaagagcct
gcaaagaggcagcgtagatggaacactgagaagactgctgaaccccaaaattctagtatt
gctttaacaaagaaggttgttcagcccacccctatcaaacccatccttggcaggactaac
tctacagttggtggggattcacccaaggagcgctttgtaccaaagtcttcaaaaacagcc
actacttctctcaaaattgagaatttcttgcggccttttacgctgaaagctgtgcaagag
ctccttgcaaggactggtgaagtctgctgtttctggatggaccagataaagacccattgc
tatgtcacgtattcttcggtagaagaagccacagagaccagaaacgcagtgtacaatctc
caatggccaccaaatggaggtcgtctcctggttgcagattttgttgatcctcaacaggtg
caaaccaagatagagggtcgggaacctgcttctccactgaaagttaccagtcctgctgtg
cctgcttcatcctctgttcaaacaccacctgctcagcagcagggtcgcaaacagcaagct
gagttggaacattcactcacacgccagccaccacctgctcctcctagtgctcctccaaca
aaagagatgctgccttcacctgttgctgataaaaatgatccccctattgttactttggat
gacctcttcagaaagaccaaagccactccccgtatctattatttaccgctgacagatgaa
gaagttgctaaaaagcttgccattaggggaaatgctaagccttga
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