Solanum verrucosum: 125815184
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Entry
125815184 CDS
T11474
Name
(RefSeq) serine/arginine-rich splicing factor SR30
KO
K12890
serine/arginine-rich splicing factor 1
Organism
sver Solanum verrucosum
Pathway
sver03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sver00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125815184
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sver03041
]
125815184
Spliceosome [BR:
sver03041
]
Common components
Common spliceosomal components
SR proteins
125815184
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
125815184
NCBI-ProteinID:
XP_049350555
LinkDB
All DBs
Position
Unknown
AA seq
289 aa
AA seq
DB search
MGRLSRTIYVGNLPGDIREREVEDLFYKYGPIVEIDLKVPPRPPGYAFVEFEDPRDADDA
IRGRDGYDFDGCRLRVELAHGGRGSSSYDRHSSYSSGSRGGFSTRSDYRVLVSGLPSSAS
WQDLKDHMRRAGDVCFSQVFRDRDGMRGIVDYTNYDDMRYAIKKLDDSLFRNQFSRAYIR
VDKYDKRHSYSRSPSPYYSRSRSYSRSRSPRRSYSSQSGSVSPRGKYSRRSVSVSPSRDF
SPARSHSRSLSRSRSPLSPPPCRRHGRSPSPSPSRSRSLSYSRSSGISE
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgtctaagtcggactatctacgtcggaaatcttcctggtgatattcgggagaga
gaagtagaagatttgttttacaagtatggtcccattgtggaaattgatttgaaagttcca
cctagaccacctggttatgcgttcgtagagtttgaagatcctcgtgatgctgatgatgcc
atccgtgggcgtgatggctatgactttgatgggtgtcgcttgcgagttgaacttgcacat
ggtgggcgaggatcatcatcatatgatcgccacagtagttacagtagtgggagtcgtggt
ggattttctacgcgctctgactatcgcgtactggtctctggactaccatcttctgcttca
tggcaagacttgaaggatcacatgcgacgagctggagatgtctgcttctctcaagttttc
cgagatcgtgacggtatgagagggattgtggactataccaactatgatgatatgagatat
gcgataaagaaacttgatgactctctgtttcgcaatcaattctctcgagcatatattagg
gtggacaagtatgataagaggcatagctattccaggagtccaagtccatattattcaaga
agcagaagttactcaagaagcaggagtcctcgacgaagctatagcagccagagcggaagt
gtatctcctaggggtaaatactctcgtcgctctgtgtctgtctcaccctcaagggatttt
tcccctgctcgctctcattcaagatctctatcaagatccagatctccactttcacctcca
ccttgtaggaggcacggaaggagcccgagcccgagcccgagcaggagcaggagtctgtcc
tattctcgctcttcggggatatcggaatga
DBGET
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