Solanum verrucosum: 125815367
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Entry
125815367 CDS
T11474
Name
(RefSeq) nuclear pore complex protein NUP160 isoform X1
KO
K14303
nuclear pore complex protein Nup160
Organism
sver Solanum verrucosum
Pathway
sver03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sver00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125815367
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sver03019
]
125815367
03036 Chromosome and associated proteins [BR:
sver03036
]
125815367
Messenger RNA biogenesis [BR:
sver03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
125815367
Chromosome and associated proteins [BR:
sver03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
125815367
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUP160_helical_2
Beta-prop_Nup120_160
TPR_NUP160_120_M
HEAT_Nup120
TPR_Nup160_C
Nucleoporin_N
NUP160_helical
Ferric_reduct
Motif
Other DBs
NCBI-GeneID:
125815367
NCBI-ProteinID:
XP_049350782
LinkDB
All DBs
Position
Unknown
AA seq
1491 aa
AA seq
DB search
MGSRSCLAGMEVPIIGSDSVKFVQLSLPSSTSASASSPTPPNAVRDVGSCSIIGNPPAYF
TWKICRSQPNVLEIMEFCGHKEFPKTGLQIVFPEALFPFAVICKNEMAFSSVKPYLLHAM
TVSGVAYLIKLENISNYVSSSHLQSDDFVDFNTHPHPHPHPHQGAATAVAGIAELMVVGR
SDGSVGCFQLGILDQRAPGFVQELRDDSGLGRLWGVLSRGRSNAAVQDLVISEFHQKRLL
FVLHSDGSLRVWDLSNRSKIFSHSLSVSPSAGSTFVRICVGNDHNNPDAITMAVLQKDES
EVGTAVISLYSLYFSTGDRINLLLDPSTKSISLEEGDLIDIKLTSNKLWILRENGLVMKE
LFCQNRNEELAYCYSLQDAFVAEQLFQGSENSSDDLLWLSHTVLSSSKDQISPFVSSVFL
HRLLLPGVYHRNVLRVTLRDFSKHFTDSEFDSLTVDGLKNEILSVIQHTVGADSPISVLQ
SWKTFCTCYYNNWCRTNVACGLLIDSATQAVGVIRKNSVSMCRSLEDIELLVFASGSSDE
HGNTICSRFDSSDSDLEREILLEILQCVNILSQQLGKAAPAIFYESLLRTPSLSSEEVIP
RLLKNLESGYSSSMALHVSELGTDVALDKEISYHKRLRKFSVDMFLSLHNLCSRATTWRS
VLHVIESYLKFLVPRKYEHNLESEGLFTVSIALTVQATSQVAKVMFESALDVHLLLSYMV
NSSSQIGMSEDEVSKVKLELVPMIQEVITEWHIINFFSTTPSESPLLEDFSSQLSSLQLD
GNVDRRSWNEKLGKSEFTLAFILLLGGHSGPSFGHLPDPNSLSKSVQEFASWIIWGRTEA
EPSVFFSHSIGLALMLLRHGQYDAVEYVLSLVDTYSRKEKICQSLQSDGGEWSTLLHLLG
CCFIAQSQCGLHGTKKERKISEAVRCFFRAASVEGAAKALQSLPNEAGWLHLGFSQQVSP
AAWKLHYYQWAMQIFEQHNMREASCQFALAALEQVDEALGSGVLDESATAVKGRLWANVF
KFTLDLNYYYDAYCAIISNPDEESKTICLRRFIIVLYERGAVKILCDGQLPFIGLSEKVE
RELAWKAERSDVSAKPNPFKLLYAFAMQRHNWRRAASYIYLYSAQLRIHGAMRDPQRRSF
ILQERLNGISAAINALQLVHPAYAWIDSPLEETYSNIYPSKRARITMEEQPPGNGTQSQR
QRSYLDVEKLENEFILTSAEHLLSLANVSWTFAKIETAPTDVIYLLVESSLYDMAFTVIL
KFWKGSALKRELERVFAAMSLKCCPKKASSVGNGHRMQSLLLTSSQDEIVVRGSPNVGPP
AQESKGSSHWETLELYLEKYKKFHAKLPVVVADTLLAADCQIELPLWLVQMFKGVPAKSG
GGMAGSESNPASLFRLYIDYGRYTEATNLLLEYIESFASLRPADIIRRKRPFAVWFPYSL
IERLWCQLQQSIKLGHMVDQSEKLKKLLQGSLMNHLHQLKVDSDDVMSSVS
NT seq
4476 nt
NT seq
+upstream
nt +downstream
nt
atgggaagtcggtcgtgtttagcaggtatggaggttcccattattggcagcgattccgtc
aagtttgttcaactctccctcccttcttctacttccgcttccgcttcttctcctactccc
cctaacgcggtaagagacgtcggttcttgctccatcattgggaaccctcccgcctatttc
acttggaagatttgcagaagtcagccaaatgtgttggaaataatggagttctgtggtcat
aaggagttcccaaaaacaggattgcaaattgtattcccagaagcactttttccatttgca
gtcatctgcaaaaatgaaatggcattttcttctgtcaaaccatatttgcttcatgccatg
acagtgtctggggttgcctaccttattaaacttgaaaacatctccaattatgtatctagc
tcccatttgcaatctgatgattttgttgacttcaacactcatcctcatcctcatcctcat
cctcatcaaggagcagcaacagcagtggcaggaatagcagaactgatggtagttggaaga
agtgatggatcagttggatgcttccagcttggcatccttgaccaacgagctccaggcttt
gttcaggaactgcgtgatgattctggtcttggtcgtttgtggggcgttttgtcaagggga
aggtcaaatgctgcagtgcaggatctagtaatatcggagtttcaccagaaaaggcttcta
tttgtgcttcattctgatgggagcttacgtgtgtgggacctttcaaatcgttccaaaatt
ttcagtcattctttaagtgtttcaccatcagcaggatccacttttgtaaggatatgtgtg
ggaaacgaccacaacaatcctgatgcaattactatggcagtactacaaaaagatgaatcg
gaagttggcacagcagtgatctctttatatagcctttatttcagtactggggacagaatt
aacttgttactggatccttcgacaaaaagcatctcattggaagagggggacctcattgat
ataaaacttacttcaaacaagttgtggatactcagagaaaatggattggtcatgaaggag
ttgttttgtcaaaataggaatgaggaattagcttattgctattctttacaggatgcattt
gttgctgagcagctgtttcaaggctctgaaaattcttcagatgatctactttggctttct
cacacagttttgtcatcttcaaaggatcagatttctccgtttgtatcttctgttttccta
cataggttgctccttccgggtgtttatcatagaaatgttcttcgggtaacattacgagat
tttagcaagcacttcactgattccgaatttgactctctgactgtggatggactgaaaaat
gaaattctgtcagtcattcaacacacggtgggagctgatagtccaatttcagtacttcag
agctggaaaaccttttgtacctgttattacaataattggtgcagaacaaatgtagcgtgt
ggtttgcttattgattcagccacacaagctgtgggtgtaattagaaaaaactcagtctcc
atgtgtcgtagtctggaggacatagagcttcttgtttttgcctcaggatcttccgatgaa
catggaaatacaatatgctctaggtttgactcctctgatagtgatcttgaacgggaaatt
cttttggaaatactgcagtgtgttaatattctcagtcaacagttgggcaaagctgctcct
gccatattttatgagtctcttcttagaacaccaagtttatcatctgaagaagtcattcct
cggttgctgaaaaatttagaaagtggatatagctcatcaatggcactccatgtatctgaa
cttggaactgatgtagcattggataaggaaatttcctaccacaaaagactcagaaaattc
tcagtagatatgtttttatccctgcacaacttgtgcagtagagctaccacatggaggagc
gttttgcatgttattgaaagctatttgaaatttctcgtgcctcgaaaatatgagcataac
ttggaatctgaaggactcttcacagtcagcattgcccttacagtgcaggcgacttctcag
gttgctaaagtgatgtttgaatctgcattggatgtgcatttgcttctaagctacatggtt
aacagtagcagtcagattggcatgtcagaggatgaggtttcgaaagtaaaacttgagtta
gttccaatgatccaagaggttattactgaatggcatatcatcaatttcttcagtaccaca
ccatctgaatctcctcttcttgaagacttcagcagtcaactttcatctttacaacttgat
ggaaatgttgatcggagatcatggaatgagaaacttggtaaatctgaattcacattggcc
tttattctgctacttggaggtcatagtgggccatcttttggacatcttcctgatcccaac
agtctaagtaaatcagtacaagaatttgctagctggataatatgggggagaacagaagca
gaaccgtctgttttcttcagtcattcgataggtcttgctctgatgttgcttagacatggg
caatacgatgctgttgagtatgtactcagtttggtggatacttattctcgcaaggagaag
atttgccaaagtcttcagagcgatggtggggagtggtccactctgttgcatcttcttggt
tgttgctttattgcacaaagccaatgtggtttgcatggaacaaagaaagaaaggaaaatt
tctgaagcagtgcggtgcttttttagagctgcgtctgttgaaggagctgccaaggctttg
caaagtttgccaaatgaagcaggatggctacaccttggtttctctcaacaagtctcacct
gctgcttggaagcttcattactatcaatgggcaatgcaaatatttgaacaacataacatg
agggaggcttcctgccagtttgctcttgctgcacttgagcaagttgacgaagctcttgga
tctggtgttcttgatgaatcagcaactgctgtcaagggacgtctttgggcaaatgtcttc
aagttcactttagatttaaactattactatgatgcgtattgtgcaatcatttcaaatcca
gatgaggaaagcaaaaccatttgtctaaggcgatttataattgttctatatgagcgagga
gctgtgaagattctttgtgatggccagctaccatttattggcttgtcagagaaagtggag
cgagagcttgcttggaaggctgagcgttcagatgtttcagccaagccaaacccgttcaag
ttgctctatgcgtttgctatgcagagacataattggcggagagcagcgagctatatttac
ttgtattcagcacaattaagaatccatggtgcaatgcgagatccccaacgacgatccttt
attctgcaggagaggctgaatgggatttctgctgctatcaatgctctacagctggttcat
cctgcatatgcttggattgattctccacttgaggaaacttattctaatatatatccaagt
aaaagggctaggataaccatggaagaacagcctcctggtaatggtactcagtctcaaagg
caaaggtcatatttagatgttgaaaaacttgagaatgagttcattctaacgtcagctgag
catttgctgtcattagcaaatgtctcttggacttttgctaaaattgagacagccccaact
gatgtgatttaccttttggttgaatcaagcttgtatgatatggcttttacagtaattctg
aaattttggaaagggtcagctttgaagagggaacttgaaagagtttttgcagctatgtca
ttgaaatgctgcccaaagaaagcctcatcagttgggaatggtcacaggatgcagagtctt
cttttgacttcatcacaggatgagattgttgtccgtggatcgcctaatgttggtccacct
gcacaggaatctaaaggcagtagccattgggagacacttgagctctatctcgaaaaatac
aaaaagtttcatgctaaattgcctgtcgttgttgccgatactcttcttgctgctgattgt
caaattgagttgcctctttggttggttcaaatgttcaagggtgtgccagcaaagagtggt
gggggaatggcgggaagtgagtcaaaccctgcttctttgtttcggctatatattgactat
ggtcgttatactgaagcgactaatctgcttctggagtacattgaatcatttgcgtcactg
agaccagctgatattattcgtcgtaagaggccatttgcagtttggtttccctattctttg
attgagcgtttatggtgtcaacttcaacaatctatcaaactaggccacatggttgatcaa
agtgaaaagctgaaaaagttgttacagggctctctcatgaaccatctacatcaacttaaa
gtggattcagatgatgtgatgtcttctgtttcctag
DBGET
integrated database retrieval system
