Solanum verrucosum: 125816449
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Entry
125816449 CDS
T11474
Name
(RefSeq) flap endonuclease GEN-like 1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
sver Solanum verrucosum
Brite
KEGG Orthology (KO) [BR:
sver00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sver03400
]
125816449
DNA repair and recombination proteins [BR:
sver03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
125816449
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XPG_I
XPG_N
Chromo_2
5_3_exonuc
Motif
Other DBs
NCBI-GeneID:
125816449
NCBI-ProteinID:
XP_049352013
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All DBs
Position
Unknown
AA seq
603 aa
AA seq
DB search
MGVGGNFWDLLKPYARAEGFDFLRNKRVAVDLSYWIVQQETALKGQIRNPHIRLTFFRTV
NLFSKFGAYPVFVTDGTASPLKSQARIARFFRASGIDLSSLPVAEEGISIERNKAFQKCE
KECVELLELLGVPVLKAKGEAEALCAQLNREGLVDACITSDSDAFLFGANCVIKNMQPNS
NEPFECYHMSDIESGLGLRRNQLIAISLLVGNDYNLTGVPGIGIETAVRFVKSFSDDEIL
YRLREIGGGDLQDFQHDVNLDSSLIPSSDESPRKTKVPHCSICGHPGSKKAHLKFSCQYC
SATANEGCIKKPLGFKCNCSPCDLDNKEKEQKRNENWKLKVCRRIASEQNFRNNEITEMY
LNKQQQYDGDYHLSWENPKIDMIVDYLAYYQHWEPSYTRQRMFPMLSTIFLRDVASNSKD
QLLGGQYEFDSIQRVKTRFGHQLYVINWKKPTREMSNAICIPSEDSDTEQELGIADESTD
LLDEPDSPQIHVKEGCSFLSTEEDMVLVQNAFPEKVSQFLRDKELKESRSRRKRPMKSEN
SESPRGVQLSITNFYRSSKVPCHEKLEESETGCPKISADTSRERDKEPIRNYSKSVRRKL
LFD
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgggggttggcggaaatttctgggatttgctgaaaccctacgctcgagcagaaggattt
gatttcttgagaaacaaacgcgtagctgtggacttgtcatattggatcgttcagcaagaa
actgcactcaaaggccaaattcgaaatcctcatatcagactcacttttttccgtaccgtc
aacctcttctctaagtttggggcatatcctgtgtttgtcacggatggtactgcatcgccg
ctaaagtctcaggcaaggattgcacgattttttcgggcatcaggaattgatttatcaagt
ttgccagtggctgaggaaggcatttcaattgaaaggaacaaggcatttcagaaatgcgaa
aaagaatgtgttgagttgcttgaactccttggagtgccagtcctaaaagcaaaaggagaa
gcggaagcactctgtgcacagttgaatagagaaggactagttgatgcttgtattacttct
gacagtgatgcatttctctttggagccaattgtgttataaaaaatatgcaacccaactcc
aatgaaccatttgagtgctatcacatgtcggatattgagtctggtctagggctgaggagg
aatcagttgatagcaatttcgcttttggtgggaaatgactacaacttgactggtgtacca
gggatcgggattgaaacagcagttcgttttgtcaaatcttttagtgatgatgagatattg
tataggttgcgggaaataggtggaggggatctacaggattttcagcacgacgtcaactta
gacagtagtttaatacccagttcagatgagagccctcggaaaaccaaagtgccacattgt
tcaatctgtggacatcccggaagcaagaaagctcacctcaagttctcttgtcagtactgc
agtgccaccgccaatgagggttgcattaagaagccattgggcttcaagtgtaattgctcc
ccatgtgatttggataataaggaaaaagaacagaaaagaaacgagaattggaagcttaaa
gtttgcagaaggatagcctcggagcagaatttccgaaacaatgagatcacagaaatgtac
ttgaacaaacaacagcaatatgatggagattatcatttatcatgggaaaatccaaagatt
gatatgatagttgattatctggcttattatcagcactgggagccatcttatacacgtcaa
agaatgtttcctatgttatccaccatatttctgagagacgtggcctcaaattccaaagat
caattgttaggcggacaatatgaatttgactccattcagcgggtgaagacaagatttgga
catcaactttacgtaatcaattggaagaaaccaacacgtgaaatgagtaatgcaatctgc
ataccttctgaagactctgatacggaacaggagctggggatagctgatgagtccacagat
ttacttgatgaacctgattctccgcagattcatgtcaaggagggatgcagctttttgtca
actgaagaagatatggtgcttgtacagaatgcttttccagaaaaggtgtcccagttcttg
agagacaaggaactaaaagaatcaagatcacgtagaaaaagaccaatgaaatctgagaat
tcagaatcacctagaggtgttcaactcagcatcaccaacttctatcgatcatccaaagtc
ccttgtcatgagaagctagaggagagtgaaactggatgtccaaagattagtgcggatact
tctagagaaagagataaagaacccatccgaaactactccaagtcagttagacgcaagctt
ttgttcgattag
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