Solanum verrucosum: 125816860
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Entry
125816860 CDS
T11474
Name
(RefSeq) vacuolar protein sorting-associated protein 9A-like
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
sver Solanum verrucosum
Pathway
sver04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
sver00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
125816860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sver04131
]
125816860
Membrane trafficking [BR:
sver04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
125816860
Protein recycling
Other Rab GTPase associated proteins
125816860
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS9
DUF5601
Motif
Other DBs
NCBI-GeneID:
125816860
NCBI-ProteinID:
XP_049352460
LinkDB
All DBs
Position
Unknown
AA seq
503 aa
AA seq
DB search
MENSDVLGSSTAPLTWHDFLQRMRDPTAADFVKSIKSFIVSFLNNAPDAERDSAAVQEFL
GNMETAFRAHSLWAGCSEEELESAGEGLEKYVMTKLFTRTFASLPEDVKVDEQLHEKIAL
IQQFVRPENLDIKPTFQNESSWLLAQKELQKINMYRAPRDKLVCILNCCKVINNLLTSVS
AKDNPPGADDFLPVLIYVTIKANPPQLHSNLLYIQRFRRQTRLVSEAAYFFTNILSAESF
ISNIDAQALSMDETEFETNMESARALLSGLSADNNVLDQSDQNAGPVPGADTSDTKQSFR
SNRPPHPATQPNFSVASTETNIKNEDQYVKSQSSMEKIPSLSDLENRGASMLIKEDSISQ
VFQSFPYLYSQAGDLTVGDIEELLTNYKRLVIKYVCLAKGSGIDNPSPPLPNNEGQTQHP
EFEFNTESEVASAGGLIDETQKDKPIDETQKDEPIDETQKDEPIDDTQKDRPVDSSLLAK
SLESDESKLKENEELSSKGEEGS
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggagaacagcgacgtgttaggatcgtctactgcaccattgacgtggcatgatttcctt
caacgaatgcgtgatccaaccgctgccgatttcgtcaaatccatcaaaagttttattgta
tcatttttgaacaatgctccggacgcagagagggatagtgcagccgtgcaggagttcctt
ggaaatatggaaacagcattcagagctcattcactttgggctggatgttccgaggaggag
ttggagagtgctggtgaaggacttgagaagtatgtcatgacgaagctatttacacgtaca
tttgcttcacttcctgaagatgtgaaagttgatgaacagcttcatgagaaaattgctttg
attcaacaatttgttaggcctgagaatttggatatcaagccaacatttcaaaatgaatca
tcatggttgcttgcgcagaaggagctacaaaagataaatatgtacagggcaccaagagac
aaacttgtgtgtattcttaattgttgcaaggttatcaataatctcctgacttctgtttca
gcaaaggataaccctccaggagcagatgattttcttcccgttctcatatatgtcaccata
aaggctaacccccctcagctgcactcaaatctactgtatatacaaaggtttaggcggcaa
acccgcttggtttctgaagcggcatacttcttcacaaacattctttctgcagaatctttc
atttcgaatattgatgcacaagctctttctatggatgagaccgagtttgaaacaaatatg
gagtctgctcgagcacttctttctggtctttcagccgacaacaatgtactggaccagagt
gatcagaacgctggacctgttcctggtgcagacacgtctgacaccaaacaaagttttagg
tcaaataggcctccacaccctgctacacagccaaatttctcagttgcatcaacagaaaca
aacatcaagaacgaggatcagtatgttaaaagccagtcatcaatggaaaagatcccgtca
ctgtcggatctagaaaacagaggggctagtatgctgatcaaggaggatagcatcagccaa
gtgttccaaagtttcccctacctatattcccaggctggtgatctaacagtgggtgatatc
gaagaactactaaccaattacaagcgcctagttatcaagtatgtttgccttgctaaagga
tcaggcattgacaatccatctccaccattgcccaataatgaaggacaaactcagcaccct
gaatttgaattcaacaccgaatctgaagttgcctcagcaggagggctaattgatgagaca
cagaaagacaagccaatcgatgagacacagaaagatgagccaattgatgaaacacagaaa
gacgagccaattgatgatacgcagaaagacaggcccgtggattcttcactacttgcaaag
tctctcgagtcagatgaatcaaagttaaaggaaaatgaagaactttcaagtaagggtgaa
gaagggagttag
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