KEGG   Solanum verrucosum: 125818108
Entry
125818108         CDS       T11474                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A-like isoform X1
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
sver  Solanum verrucosum
Pathway
sver03030  DNA replication
sver03410  Base excision repair
sver03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sver00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    125818108
   03410 Base excision repair
    125818108
   03420 Nucleotide excision repair
    125818108
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sver03032]
    125818108
   03400 DNA repair and recombination proteins [BR:sver03400]
    125818108
Enzymes [BR:sver01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     125818108
DNA replication proteins [BR:sver03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    125818108
DNA repair and recombination proteins [BR:sver03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      125818108
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 zf_DPOE_2 DNA_pol_B zf-DPOE RNase_H_2 DNA_pol_B_exo2
Other DBs
NCBI-GeneID: 125818108
NCBI-ProteinID: XP_049353590
LinkDB
Position
Unknown
AA seq 2218 aa
MNAAENSRRWDRRDSRFSKKQKLILNSEEQLESKLGFDAFTEGDKRLGWLLTLASSSWED
QETRKVYSCVDLYFVCQDGSTFKAKYKFRPYFYVATKDKMEMDVDSYLRRRYESQIADIE
VLEKEDLDLKNHLSGLHRSYLKISFDTVQQLMDVKRDLTHIVERNQTKFDTIEAYESILT
GKSKQRSQDFIDYITDLREYDVPYHVRFAIDTDVRCGQWYDVSVSSSDVMLEKRTDLLQR
AEVHVCAFDIETTKLPLKFPDAEYDSIMMISYMVDGQGYLIINRECVGEDIEDIEYTPKP
EYEGHFKVSNVKNEEGLLRHWFAHMQVAKPGIYVTYNGDFFDWPFVETRATHYGLSLKDE
LGFSCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMV
RFAKEKPQMMASYSVSDAVSTYYLYMTYVHPFIFSLATIIPMPPDEVLRKGSGTLCEMLL
MVQAYKANVICPNKHQSDPEKFYGSQLLDSETYIGGHVECLESGVFRSDIPTSFKLDPSA
YELLISNLDRDLQYSIVVEGKMDLESVTNYDEVKNAIMEKLMSLRDDPLREECPLIYHLD
VAAMYPNIILTNRLQPPSIVSDEICTACDFNRPGKKCLRKLEWVWRGEMYMAKRSDYYHI
KRQLESELVEVGDGQRSKSFLDLPKAEQQVKLKDRLKKYCQKAYKRVLEKPVTEVREAGI
CMRENPFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVVYDSLQL
AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLVEKIGKPLELDTDGIWC
ALPGSFPENCTFKTKDPKKKLTISYPCVMLNVDVARNNTNDQYQTLKDPINKTYTIHSEC
SIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQA
ELFDKFLHGSTLEECYSAVAAVADRWLDLLDNQGQDIADSELLGYISESSTMSKSLADYG
EQKSCAVTTAKRLADFLGDAMVKEKGLLCQYIVACEPKGTPVSERAIPVAIFETNAEIMR
FYVKKWCKISSEIGIRSIIDWSYYKQRLGSAIQKIITIPAAMQKVSNPVPRVVHPDWLHK
KVREKEDKFRQRKLNDIFSSVNKDDTVASKHSKNQQNFEDLEDFRHSGKSSIFGPRPVVH
RHGVNKEHLVNTSDRLDSQQKNGHASSPSKMLPSQEIADVEDIDRNVDYHGWLQQKKRKW
KEIREERKRQRLDTSRTVNHVSGSADMFHSMANRKRQGKTGVNSYFERHELALTRNHWQI
VQLEPTSQHGQFFAWVVVEGVMHKISVTIPRVFYLNSKAPITEEFPGRRVNKILPHGRHS
YNLIEVTIDEDQFKSESKKLAAHLADPEVEGIYETKVPLEFSAILQMGCVCKVDKATKKR
NPQDGWSLSELHMKTTTECPYLDQSITFFYLYHSVSDVRAIYVGHFPASKMIHVVVVNPF
QNKELSQNVLERHFYEACQTLSGQPITQKEGISFKLDYVGYIKDAERILQRAVNEHRHHG
PAVAMIECPNAHLLKSGIRALEDFPCISIPCNARDSQYQALGWQNVAAKIGMQRCATSPQ
WLNERITLSRYAHVPIGNFDVDWLMHTADIFFSRALRDQQQVLWISDNGIPDLGGINDEV
SSFMDEVNQPVLTYPGAYRKVTVELKIHHLAVDALLKSNQVNEMEGGTLFGLDQDLNPTT
DFTNEQYFFDATTSCAPAFRVLKQLIQRCLTDAVTSGNIFADAMLQHLYRWLCSPRSRLH
DPALHSMLHKVMQKMFALLVAELRKLGAAIVFANFSKIIIDTGKSDIFAAKAYCDNVIKN
VQSRELFEWIELEPLQFWHSLLFMDQYNYGGIRARHSDEPLEVNSEPGEESVCGESQVDI
VSSWNIAENLPKATQDRFILIVSEFMYGPWKYAQEQATHRVSASDGDLCTPSITAALAET
FDLQMAEDLKKKIGTYFTDKLLKIVCDPNLQMKVMNNSQKIQETPDANSQSISHVQKGDP
ALEFIKHVCAVLALDQNVQHEVLIMRKNLLKLVRVREFAPEAEFRSLSVSYTLPNVICSY
CNDCRDLDLCRDRALISQEWRCAVPQCGQPYDREAMENALVQIVRQRERLYHLQDLVCLK
CHQIKAAHLSDHCACAGSFSCKEDVSDFRNKMQVFLNIAVNQKFQLLQECTSWILEAR
NT seq 6657 nt   +upstreamnt  +downstreamnt
atgaacgccgctgaaaatagccggcgctgggaccggcgagactctaggttttcaaagaag
cagaaactcatacttaactccgaagaacagctcgaatccaagctaggattcgatgctttc
actgaaggagataaacgactcggctggcttctaactcttgcctcttcgtcgtgggaggat
caggagactcgcaaagtgtacagttgtgttgatctttattttgtttgtcaggatggttca
acattcaaagcaaagtacaaattcaggccatatttttacgtggcaacaaaggataaaatg
gaaatggatgtcgactcatatctgagaaggcgatatgaatctcaaattgcagatattgaa
gttttagagaaagaggatcttgatcttaaaaaccatctgtctggcctacacagatcatac
ttaaagatatcatttgacactgtccaacagttgatggacgtgaagcgtgatctaacacac
attgttgagagaaatcaaacgaagtttgatactatagaagcatatgaatctatactgacg
gggaaaagcaagcagcgaagtcaagattttatagattatatcactgatctacgtgaatat
gatgtcccctaccatgttcgctttgccattgacactgatgttagatgtggtcagtggtat
gatgtgagtgtatctagctccgatgttatgttggagaagaggactgatctcttgcagcga
gctgaagttcatgtttgcgcctttgatattgaaaccacaaagcttcctcttaaatttcct
gatgccgaatatgattccataatgatgatctcatacatggttgatggccaaggctatctc
attattaacagagagtgtgttggggaagatattgaggatatagagtataccccaaaacca
gaatatgaagggcattttaaagtgtcaaatgtgaaaaatgaggaagggctccttaggcac
tggttcgcgcacatgcaagtggcgaagcctggtatctatgtaacatataacggtgacttc
tttgattggccatttgttgagacaagagctactcattatggcttgagcctgaaggatgag
cttgggttttcctgtgacaagaatcaaggggaatgtcgtgctaaatttgcttgccatctg
gactgttttgcttgggttaaacgtgatagttatcttcctcaaggaagccaaggtctgaag
gctgtaacgaaggccaagttgggttatgatcctctagaagttaatcctgaggatatggtt
cgctttgcaaaggaaaaaccacagatgatggcttcatattctgtttcagatgctgtttca
acatactacttgtacatgacttacgttcatcccttcattttctcccttgcaaccataata
cccatgccgccagatgaagtcttgcgcaaaggaagtgggactttgtgtgaaatgcttctt
atggttcaggcttataaggcaaatgttatctgtccaaacaagcaccagtctgatccagag
aagttttatggtagtcaactccttgacagtgagacatacattggtggtcatgtggaatgc
ctagaaagtggtgtattcagatctgacatcccaaccagttttaaactcgatccctctgcc
tatgagctattgatcagcaaccttgatagagatctgcagtattctattgtagttgagggg
aagatggacttggaatctgtcacaaattatgatgaagtgaagaatgccatcatggaaaag
ctaatgagcttacgagatgatcctttaagggaagaatgccccctcatatatcatcttgat
gtagctgccatgtatccaaacatcatacttacaaataggcttcagccaccatcaatagta
tcagatgagatatgcactgcatgcgattttaatcgtcctggcaaaaagtgtctccggaag
cttgaatgggtttggcgtggtgaaatgtacatggcaaaaaggagtgattattaccacata
aagagacaactcgagtctgaacttgttgaagtaggagatggtcaacgatcaaagtctttt
cttgatttgcctaaagcagaacaacaagtaaagctcaaggaccgtttaaagaaatactgt
caaaaggcatataaaagagttcttgaaaagccggtcacagaagttcgagaagcagggatc
tgcatgcgagaaaatcctttttatgttgatactgtacggagtttccgagataggaggtat
gaatacaaagggctcaataaagtttggaaaggtaagctgtctgaagcaaaggctagtgga
aattccataaagattcaagaagcacaggacatggtagttgtgtatgattcattgcagctg
gctcataaatgcattttaaactccttttatggttatgtcatgcgcaagggtgcaagatgg
tactcaatggagatggctggagttgtcacatatacaggtgcaaaaatcattcagaatgct
cgattgttggttgaaaaaattggaaagcccctcgaattagacacagatggtatttggtgt
gcattaccaggctctttccctgagaattgtaccttcaagacaaaagatccaaagaagaag
ctaacaatctcttatccttgtgtaatgctgaatgttgatgtggcaagaaacaataccaat
gatcagtaccagacgctcaaggaccccatcaataagacgtatacaatacacagtgaatgc
tcaattgagtttgaagtggatggaccatataaggcaatgattcttcccgcttccaaggaa
gaaggtattctaataaagaagcgctatgcagttttcaatgatgatggtacgcttgccgaa
cttaaaggttttgaaattaaacgtagaggtgagctaaagctcatcaaagtatttcaggct
gagctttttgataagttcctccatggatcaaccttagaggaatgctattcagcagttgct
gctgtggcagatcggtggcttgacctgcttgataatcaaggccaagatattgcagacagt
gagttgctcggatatatatctgaatcaagcacaatgagcaagtccctggccgattatggt
gagcaaaagtcatgtgcagtaactacagctaaacggcttgctgattttctgggggatgca
atggtcaaagagaaaggattgctttgtcaatatattgttgcatgtgagccaaagggaacc
ccagtaagcgaacgtgctattcctgttgcaatatttgaaactaatgcagagatcatgagg
ttctatgtcaaaaagtggtgcaaaatatcatcggaaatcggaatacgctccattattgat
tggtcttattacaagcaacgacttggttcagcaatccaaaagattatcacaattcctgct
gcaatgcagaaggtttcaaaccctgtcccaagggtggttcatcctgattggctgcataag
aaggttcgtgaaaaagaagacaaatttcgccaacgaaaattgaatgatatcttcagttca
gtgaacaaagatgacacagtggccagtaaacattctaaaaatcagcaaaattttgaagac
ctggaagactttagacacagtggtaaatcgtctatatttggtccaaggcctgttgttcat
cgtcatggagtcaacaaagaacatctagtgaacactagtgatcgattggacagtcaacag
aaaaatggtcatgctagcagtccatccaagatgttaccatcacaagaaattgctgatgtg
gaagatattgacaggaatgtagattatcatggatggctacagcaaaaaaagagaaaatgg
aaagagattcgtgaagaaaggaaacgccaaaggttggatacgtcgaggacagtaaaccat
gttagtggcagtgctgacatgtttcatagcatggcaaatcgcaaacgccagggaaaaact
ggggttaattcctactttgagcgacacgaattagccctcacacgaaatcactggcagata
gttcaacttgaaccgacttcacaacatggacaattttttgcatgggtagttgtggaagga
gtcatgcacaaaatttcagtaactatccccagagtgttttacctcaactccaaagctcct
ataactgaggaatttcctggaagacgtgtcaacaagattcttcctcatggacgccatagc
tacaatttaattgaggtcactattgatgaggatcaattcaagtcagaaagcaaaaagcta
gcagctcaccttgctgacccagaagtggagggaatatatgaaacaaaggttccattagag
ttcagtgctattcttcagatgggttgtgtttgtaaagttgataaagcaactaagaaaagg
aatccacaagatggttggagtttgagtgagctgcatatgaagacaacaactgagtgcccg
tatttggatcagtccataactttcttctacttgtatcatagtgtgtcggatgtacgagcc
atttatgtgggacattttcctgcgtccaagatgatacatgttgtggttgtcaatccattt
caaaacaaggaattatcacaaaacgttcttgaaagacatttttatgaagcttgccaaaca
ttgtctgggcagcctatcacacaaaaggaaggtattagtttcaagttggattatgtcggg
tacatcaaggatgctgagaggattctacagagagcagttaatgagcataggcatcatgga
cctgcagttgccatgattgagtgccctaatgcccatttactgaagtctggcatacgagct
ttggaggattttccttgcatcagcatcccatgtaatgctcgggatagtcaatatcaggca
ctaggttggcaaaatgtagcagcaaagattggaatgcagcgatgcgcgacatccccccag
tggttaaatgaaaggatcactctctcaagatatgcccatgttcccatagggaattttgat
gttgattggctcatgcatacagcagatatcttcttttccagagcacttcgtgatcagcaa
caggtcttgtggatatctgataatggaatccctgacttaggaggcataaatgatgaagta
tcatcttttatggatgaggtcaatcagccagttcttacttatcctggtgcatatagaaaa
gttactgttgagctgaagattcatcatctggctgttgatgctctactgaaaagcaaccaa
gtaaacgaaatggaaggaggcactctgtttggattggaccaggacttgaaccctacgacg
gattttactaatgaacagtacttctttgacgcaacaacatcctgtgcaccagcatttcgt
gtacttaagcagttgattcaaaggtgccttacagatgcagtaacatcaggaaacatattt
gctgatgcaatgctgcaacatttgtaccgatggctctgcagcccccgatctagactgcat
gacccagctcttcacagtatgcttcacaaggttatgcaaaagatgtttgcattgcttgtg
gctgaactccgaaaattgggtgctgctattgtgtttgccaacttctcaaaaatcataatt
gacactgggaagtcagatatttttgctgccaaagcctactgtgataatgttattaaaaat
gtacaatcaagagaattgtttgagtggattgaacttgagccgttgcagttttggcactcg
ttgcttttcatggatcagtacaattatggtggaattcgagctagacatagtgatgaacct
ttagaagttaactcagaaccaggtgaagaaagtgtgtgtggtgaatctcaagtcgatatc
gtgtcaagctggaacattgcagaaaatttaccgaaggcaactcaggatcgcttcattttg
attgtttcggagtttatgtatggtccatggaaatatgcacaagaacaagctacacatcga
gtatctgctagcgatggtgatttatgtacaccatcaatcactgctgcacttgctgaaaca
tttgatttgcaaatggcagaagatctaaagaagaagattggaacttacttcactgacaaa
cttctgaaaattgtttgtgaccctaatcttcaaatgaaagtgatgaacaactctcagaag
atacaggagacaccagatgcaaactcacaatctattagccatgtccaaaagggggatcca
gctttagagttcattaagcatgtctgtgcagttttggcccttgaccagaatgtgcagcat
gaagttctgatcatgaggaaaaatttattaaaacttgttcgtgtgagggaatttgctcca
gaggcagaatttcgtagtctttctgtatcatatacccttccaaatgtcatttgcagttac
tgcaatgactgcagagaccttgacttgtgtcgagacagagctttgatttctcaggagtgg
cgttgtgctgttccccagtgtgggcaaccttatgatcgtgaagcaatggaaaatgctctt
gttcaaattgttcggcagagagagaggctataccatcttcaggatctagtatgcctaaaa
tgccaccagattaaagctgcacatttatcagatcactgtgcttgtgccggatcatttagc
tgcaaggaagatgtctcagatttccgcaataaaatgcaagtcttcttgaacatagccgta
aatcaaaagtttcaattgctccaagaatgcacttcttggattttggaagccagataa

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