KEGG   Solanum verrucosum: 125818165
Entry
125818165         CDS       T11474                                 
Name
(RefSeq) DNA repair protein RAD5A
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
sver  Solanum verrucosum
Brite
KEGG Orthology (KO) [BR:sver00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sver03400]
    125818165
DNA repair and recombination proteins [BR:sver03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    125818165
SSDB
Motif
Pfam: SNF2-rel_dom UBA_RAD5A Helicase_C HIRAN zf-C3HC4 zf-C3HC4_3 zf-C3HC4_2 zf-RING_UBOX zf-RING_2 DEAD Prok-RING_4 zf-C3HC4_4 RING_XB3-XBAT31 zf-RING_5 ResIII zf-RING_4 zf-ANAPC11 zf-P11 zf-Di19
Other DBs
NCBI-GeneID: 125818165
NCBI-ProteinID: XP_049353663
LinkDB
Position
Unknown
AA seq 1040 aa
MAGIKVTEELVSTVRSIVGDEYTEMDIIRSLHMAKNDPTAAINIIFDTPSFKKIEIRNTH
LNSEAGNVSSKIKEAEISRVSSNEELDTESEFGDNGLVGKRAGECGGNGLVGKRTGCDTG
SEWWYVGCGEVAGMSTCKGRILKPGDEVDFTFPVEKKLSSPSPGKFGGGRGRQAAACSEI
VRFSTKACGEIGRIPNEWARCILPLVRDKKIRIEGCCKSAPNILGIMDSVLLSVRVHINS
SMFRKSHQTSLKARSSPADDTVVHPLPTLFHLLGLTPFKKAEFTPADLYTRKRPLNEQDS
SGGPASLLRANLSKSSSSADGDKVEDDESISDTDLDCIVGLADSSKLQEMEPPSTLQCEL
RPYQKQALHWMTQLERGRNTDEAATTLHPCWNAYRLKDERELVVYLNAFSGDATTEFPST
LEMARGGILADSMGLGKTIMTISLLLSHSERGGSSGSQSTSQLSSENGEASNILGHSPTF
AKKSAKFSSLDKLLKHKPILISGGNLIICPMTLLGQWKAEIEAHAQPGALSVYVYYGQTR
SKDAKVLARSDVVLTTYGVLASEFSAENAEDSGGLLSIRWFRVVLDEAHTIKSSKSQISN
AAAALIADRRWCLTGTPIQNNLEDIYSLLRFLRVEPWGSWAWWNKLIQKPFEEGDERGLK
LVQSILSLIMLRRTKSSTDREGRPILVLPPADIQVIYCELTEAERDFYDALYKRSKVKFD
QFVEQGRVLHNYASILELLLRLRQCCDHPFLVMSRGDTQEFSDLNKLAKRFLKGGKETGE
GKDVPSRAYIQEVVEELRNGEQGECPICLEAFEDAVLTPCAHRLCRECLLASWRSSNSGL
CPVCRNTVSRQELITAPSDNRFQVDVEKNWVESSKVSALLFELKRLHSVGSKSIVFSQWT
AFLDLLQIPLSRSSIPFVRLDGTLNQQQREKVIKKFSEEDDISVLLMSLKAGGVGINLTA
ASNAFVMDPWWNPAVEEQAVMRVHRIGQTKQVMIKRFIVKGSVEERMEAVQARKQRMISG
ALTDQEVRTARIEELKMLFA
NT seq 3123 nt   +upstreamnt  +downstreamnt
atggcggggatcaaagtcactgaggagcttgtttcaacggtgcgttcaattgttggcgat
gaatatacagagatggacataattagatcacttcacatggcgaaaaacgatcctacagct
gcaataaacatcattttcgacaccccgagtttcaagaaaattgaaattcgcaatacccat
ttgaattcggaagctgggaatgttagtagtaagatcaaagaagctgagattagtagagtt
tcttcaaatgaggaattggatactgaaagtgaatttggggataatgggttggtgggtaag
agggctggtgagtgtgggggtaatgggttggtgggtaagaggactgggtgtgatacgggg
agtgaatggtggtatgtggggtgtggtgaggttgctggtatgtcaacttgtaaagggagg
attttgaagcctggtgatgaagttgattttacattcccagtggagaagaaattgagttca
ccttcacctgggaagtttggcggtggacgagggcgtcaagcagctgcgtgttctgaaatt
gtaaggttttctacaaaggcttgtggagagattgggcgtattccaaatgaatgggctcga
tgtattttgcctctggtgagggataaaaagattagaattgaaggatgttgcaaatcggcc
cctaatatattagggattatggactctgttcttttgtctgtcagagtgcatattaacagt
tccatgtttcgtaaaagccatcagacatcactaaaggctagaagcagtcccgcagatgat
acagttgttcacccccttcccactttgttccatttgctcgggcttactccttttaagaag
gcagaatttactccagctgatttatacacgaggaagcggcctttgaacgaacaggacagc
tccggaggtcctgcctcattattgcgtgcaaacttatccaaaagctcctcatctgcagat
ggagataaagttgaggatgatgagtcaatttctgatactgatcttgactgtattgttggt
ttagctgatagctcgaagctacaggaaatggagccaccaagtactctccagtgcgaactg
cgaccctatcagaagcaggcgcttcattggatgacgcaactggagaggggaagaaacacg
gatgaagcagcaacaactctgcatccatgttggaatgcttaccgcctgaaagacgagagg
gagcttgttgtttacttgaatgcattttcgggtgatgcgaccactgaatttccaagtacc
cttgaaatggctagaggaggaattttggcagattccatggggctagggaagactataatg
actatatctctcctcctcagtcattctgaaagaggtggatcatcaggaagccaatctaca
agtcagctgtctagtgaaaatggagaagctagtaatatcttaggtcattctccgactttt
gcgaagaaatctgcaaaattctctagtcttgataagcttttgaaacataagccgatactt
atctctggtggcaatctgattatatgtccaatgacgctactgggtcaatggaaggcagag
attgaagcccatgcacaacctggggctctatctgtttatgtttactatgggcagacaaga
tcaaaggatgcaaaagtgcttgctcgaagtgatgtcgtgctaacgacatatggggtgttg
gcctccgaattttctgccgagaatgctgaggacagtgggggccttctctctattagatgg
tttagagtggtgcttgatgaggcacatactatcaaatcttctaaaagccaaatctcaaat
gctgctgctgctcttattgctgaccgtcggtggtgtcttactggtacccctatccagaac
aatctggaggatatttacagtctactaagatttttgagagtcgaaccatggggaagctgg
gcatggtggaacaagcttattcagaaaccttttgaggagggagatgagagggggctaaag
ttggttcaatcaatattaagtctgattatgttgagaagaacaaagtctagtacagataga
gaaggaaggccaattttagttctaccaccagcagatattcaagtgatatattgtgaactt
acagaagcagagcgcgacttctatgatgctttgtataaaagatccaaggtgaagtttgat
cagtttgttgagcaaggacgggttctccacaactatgcttctatattggagttgcttttg
cgacttcgtcaatgttgtgaccatccgtttcttgtcatgagtcgaggtgatactcaagaa
ttctctgatctgaataagcttgctaaacgtttccttaagggtggtaaggagactggagaa
ggcaaggatgtcccttcacgtgcctatattcaggaggttgtggaagagttgcggaatgga
gaacagggtgaatgccctatttgtcttgaagcttttgaagatgcggtgttgactccatgt
gctcataggttatgtcgagagtgtctcttggcaagctggcgaagttctaattcaggcctc
tgtcctgtttgtagaaacactgtcagtaggcaggagcttataacagccccgtcagacaac
cgctttcaggttgatgttgaaaagaattgggtggagtcatcaaaagtatctgccttgttg
tttgaattaaaacgtcttcattctgttggctccaaaagcattgtttttagtcagtggact
gccttcttagatctactgcagattcctctttctcgtagtagtattccatttgttcgcctt
gatgggacgttaaaccaacaacaacgtgagaaagttataaagaagttctcagaagaggat
gacatatcggtgttgctaatgtcattgaaggctggtggtgttgggataaacctgacggct
gcatctaatgcttttgtcatggatccttggtggaatccagctgttgaggaacaagcggtc
atgcgtgttcatcgtattggacaaactaagcaagtaatgatcaaacgattcattgtgaag
ggttcagtagaggaaagaatggaggcagtccaagctaggaagcaacggatgatttctggt
gctttgaccgaccaagaagttcggactgcaagaattgaggaactcaagatgcttttcgca
tag

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